| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6535 |
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| Symbol | |
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| ID | 5674850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7945966 |
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| End bp | 7947390 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641245384 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001510778 |
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| Protein GI | 158318270 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.240801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCTTT CGGCAGCGCT CCGGCGGGGA CCTAGACTGC GCCGGGTGCA CCCATTCGAT
GTGCCGATCT TCGGCGCGCA GCGCCCGGAG CTTGTCCAGG CGGTGGTGGA TTACGCCCGC
ACTCGGATGA GTCTGGATCC CGTCCCGCTG GACGGTCCGA GCCCACCGGC CGAGCTGTCC
GCGCGGGCCG GGCGCACGAT CACCCCGGAG GGCATCGGTG GTCTCGCCGC GCTGCGGGTG
TTCGACGAGG TGCTGTCGCG TGCCTGTATA TCGGCGGACC ACCCGCGCAA CCTCGCCTTC
ATCCCGGCGG CGCCGACCCG GGCGGCGATC CTGTTCGACC TGGTGGTCGG CGCCTCGTCG
ATCTACGGCG GGAGCTGGCT GGAGGGCGGC GGTGCCGTCC ACGCGGAGAA CGAGGCGCTG
CGCTGGCTGT CCGACCTTGT CGGCTTCCCG CCGGGGGCCG GCGGGGTGTT CGTCCAGGGC
GGGACGGTCG GCAACGTCTC GGCGCTCGTC GCCGCGCGGC ACGCCGTCCG GGCGCGCCGG
GCGGCCCGAG GGCTCCCTCA GCCGCCGCGC TGGCGGTTCC TGTGCGGCTC CGAGGCGCAC
TCCTCGCTGC GCCAGGCGGC CGAGGTCATG GACGTCGACC TGGTGGTCGT CCCGACCGGC
GACGACGGGC GGCTGACCGG CGGGGCGGTG GCCACCGCGC TCGACGAGCT CGCCGGCGAC
GGCGGGGTGT TCGCCGTGGT GGCCACGGCC GGCAGCACCC AGTTCGGGAT CGTCGACGAC
ATCCGCGGTG TCGTCGACGC CTGCCGCCGG CACGACGTGT GGGTCCACGT CGACGGGGCC
TACGGCCTCG CGGGCGCCGC CGCCGCGTCC GTGCGGCACC TGTTCGACGG CATCGAGGAG
ACCGACTCCT TCATCGTCGA CCCGCACAAG TGGCTGTTCG CGCCGTTCGA CGCCTGCGCG
CTGGTGTACC GCGACCCGGC CGCGGCCCGC GCCGCCCACG CGCAGCAGGC GGGCTATCTG
GAGGTGCTCG ACACGCCGGG GGCCTGGAAC CCCTCGGACT ACGAGGTCGG GCTCTCCCGG
CGGGCCCGCG GCCTGCCGTT CTGGTTCTCG CTCGCCACCT ACGGGACACA TGCGTACGGT
TCCGCGGTCG AGCGCTGCCT GGCGACGGCG CGGACGGCGG CCGACCACAT CCGGGCCCTG
CCGTTCGTGG AGCTCGTGCG CGAGCCGGAG CTCTCGGTCG TCGTGTTCCG CCGGCTGGGC
TGGCCGGCCG AGAGCTATCA CCGGTGGACG GAACGCCTGC TCGCCGAAGG GCTCGCGTTC
GTGACCCCGA CCGTGCACCG GCAGGAGACG GTGACCCGGT TCGCGATCGT CAATCCGGCG
ACCACACCGG AGGACATCGA CCTGATTCTC GCCACCATGG CCTGA
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| Protein sequence | MILSAALRRG PRLRRVHPFD VPIFGAQRPE LVQAVVDYAR TRMSLDPVPL DGPSPPAELS
ARAGRTITPE GIGGLAALRV FDEVLSRACI SADHPRNLAF IPAAPTRAAI LFDLVVGASS
IYGGSWLEGG GAVHAENEAL RWLSDLVGFP PGAGGVFVQG GTVGNVSALV AARHAVRARR
AARGLPQPPR WRFLCGSEAH SSLRQAAEVM DVDLVVVPTG DDGRLTGGAV ATALDELAGD
GGVFAVVATA GSTQFGIVDD IRGVVDACRR HDVWVHVDGA YGLAGAAAAS VRHLFDGIEE
TDSFIVDPHK WLFAPFDACA LVYRDPAAAR AAHAQQAGYL EVLDTPGAWN PSDYEVGLSR
RARGLPFWFS LATYGTHAYG SAVERCLATA RTAADHIRAL PFVELVREPE LSVVVFRRLG
WPAESYHRWT ERLLAEGLAF VTPTVHRQET VTRFAIVNPA TTPEDIDLIL ATMA
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