Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6522 |
Symbol | |
ID | 5674837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7929300 |
End bp | 7930970 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641245370 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001510765 |
Protein GI | 158318257 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0707299 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGGCT GGCGGCTGCG CCGGCGGCTC GCCGCGGTGT ACATCGCGTT GTCCATGGTG CTGCTGCTGG CCGCCGGGAT CGTCGCCTGG TCGCTGGTCC GGCTCGACGA CGCCATCCAT GTGCGCAGCG ACGTCCTGGC GCCCGCGCAG ACAGTCACGG TCCGGTTGAC GTCCAGCCTG GTCGACCAGG AGACCGGCAT GCGCGGGTAT CTCCTGCAGG GCGACCCCGC GTTCCTGACC CCGTACGAGA CCGGGCGGCA GTCCGAGGCG AGGCTGAGCT CCGTCCTCGT CGGCCGGGTG GCCGCCCGCC CGGAGCTCGA GCGGCTGCTC GGGGTCCTCC AGGCGCGGAT CGCGGACTGG CACCGCGACT ACGCCGACCC GTCCATCGCG GCGGTCCGCC GGGGGGGCAC CGACTCGCCG GGAATCCTCG ACCCGGTTCT CGGCAAGACC CGGTTCGACG CGGTGCGCGC CGCGGCCGCG GACTTCGACG ACGCCGTCCG GATCGCCGCG CTGGCGGCCC GTGAGGACGT CACCAACGCA CTGCGGACGC TCATCATCTC GCTCGTCGTG GCCGCGCTGG CGCTCATCGT GCTGCTGGCA CTCATCTTCC GAGCGCTGCG GGTGTGGGTG ACGCGGCCGC TGGAGGCCGT CGGCACGGAC GTCCGCGAGG TCGCCGCCGG GCACCTGGAG CACGCGGTGG AGTCGGTGGG GCCGCCCGAC ATCGTCACCC TGGCACGGGA CGTCGAATCG ATGCGCCTGC AGCTCATCGG TGAGCTCGAG GCCGCGCGCA GGGCGCGGCT GTCCACCGAG GCGCAGGCGG AGATCCTGCG CCGGTCCAAC CGCGACCTGG AGCAGTTCGC CTACGTCGCC TCGCACGACC TGCAGGAGCC GTTGCGCAAG GTGGCCAGCT TCTGCCAGCT TCTGTCCCGG CGCTACGGCG ACCAGCTCGA CGAGCGCGGG ACCCAGTACA TCCACTTCGC CGTCGACGGC GCGAAGCGCA TGCAGCAGCT CATCAACGAC CTGCTCGCCT TCTCCAGGGT CGGCCGCACC ACCGACAGTT TCGTCGACGT CCCGTTGGGC GAGGTCTTCG AGCGGGTGGT GGGGACGCTG TCGCTCGCCC TGGAGAGCTC CGGCGGCGAG GTGACCGCCA GCGATCTCCC GGCGGTGCCC GGCGACCCCG TTCTGCTGGC CCAGCTCCTG CAGAACCTGA TCGGCAACGC GCTGAAGTTC CGTGGCGACG AGGCCCCGCG GGTGCGGATC GGGGCGATCG ACCGCGACGT CGAGTGGGAG CTGTTCTGCG CGGACAACGG CATCGGCATC GAGCCGGAGT ACGCCGAGAA GATCTTCGTG ATCTTCCAGC GCCTGCACGC GCGGGACGTC TACGAGGGCA CCGGCATCGG TCTGGCGCTG TGCCGCAAGA TCGTCGAGTT CCACGGTGGC CGGATCTGGC TCGACGGTAC GGTGGAGTCC GGGACCGCCT TCCGCTGGAC GCTCCCGAAA CGCCCGGCCG TGGTCCTGCC CGCCGACCTT GAGGCGGACG GGGCGCCGCC GGCCTCGGTC ACCGGTCCTG TCTCGTCCGC CGGTCCCGGT CCCGGTTCGG TTGCTGGTCC TGTCGTGGTT GCTGGTCCCG TCGTGGCCGC CGTTCCGCCG AAGTCAGGAG ATCGTTCGTG A
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Protein sequence | MRGWRLRRRL AAVYIALSMV LLLAAGIVAW SLVRLDDAIH VRSDVLAPAQ TVTVRLTSSL VDQETGMRGY LLQGDPAFLT PYETGRQSEA RLSSVLVGRV AARPELERLL GVLQARIADW HRDYADPSIA AVRRGGTDSP GILDPVLGKT RFDAVRAAAA DFDDAVRIAA LAAREDVTNA LRTLIISLVV AALALIVLLA LIFRALRVWV TRPLEAVGTD VREVAAGHLE HAVESVGPPD IVTLARDVES MRLQLIGELE AARRARLSTE AQAEILRRSN RDLEQFAYVA SHDLQEPLRK VASFCQLLSR RYGDQLDERG TQYIHFAVDG AKRMQQLIND LLAFSRVGRT TDSFVDVPLG EVFERVVGTL SLALESSGGE VTASDLPAVP GDPVLLAQLL QNLIGNALKF RGDEAPRVRI GAIDRDVEWE LFCADNGIGI EPEYAEKIFV IFQRLHARDV YEGTGIGLAL CRKIVEFHGG RIWLDGTVES GTAFRWTLPK RPAVVLPADL EADGAPPASV TGPVSSAGPG PGSVAGPVVV AGPVVAAVPP KSGDRS
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