Gene Franean1_6521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6521 
Symbol 
ID5674836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7928863 
End bp7929303 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content69% 
IMG OID641245369 
Productresponse regulator receiver protein 
Protein accessionYP_001510764 
Protein GI158318256 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.66047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0570772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC CCGTTGTCCC GGTCGAGGTC CTGCTGGTCG AGGACGACCC CGGCGACGTC 
CTGATGACCC GCGAGGCGTT CGAGGACCAC AAGCTCAAGA ACAACCTCAA CGTGGTCAGC
GACGGTGTCG AGGCATTGGC CTACCTGCGT GGGGAGGGCC CGTACGCCGG CGCGCCGCGG
CCCGACCTGA TCCTGCTCGA CCTGAACCTG CCCCGCCGGG ACGGGCGGCA GGTGCTGGCC
GAGGTCAAGG CGGACGAGCG GCTGCGGCGC ATCCCCATCG TTGTGCTGAC CACCTCGGAG
GCGGAGGAGG ACGTGCTGCG CAGCTACGAC CTGCACGCCA ACGCCTACAT CACCAAGCCC
GTGGACTTCG AGCGGTTCGT GGCGGTTGTG CGCCAGATCG ACGACTTCTT CATCACCGTC
GCCCGGCTGC CCGCGCAGTA G
 
Protein sequence
MTEPVVPVEV LLVEDDPGDV LMTREAFEDH KLKNNLNVVS DGVEALAYLR GEGPYAGAPR 
PDLILLDLNL PRRDGRQVLA EVKADERLRR IPIVVLTTSE AEEDVLRSYD LHANAYITKP
VDFERFVAVV RQIDDFFITV ARLPAQ