Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6521 |
Symbol | |
ID | 5674836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7928863 |
End bp | 7929303 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641245369 |
Product | response regulator receiver protein |
Protein accession | YP_001510764 |
Protein GI | 158318256 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.66047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0570772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGC CCGTTGTCCC GGTCGAGGTC CTGCTGGTCG AGGACGACCC CGGCGACGTC CTGATGACCC GCGAGGCGTT CGAGGACCAC AAGCTCAAGA ACAACCTCAA CGTGGTCAGC GACGGTGTCG AGGCATTGGC CTACCTGCGT GGGGAGGGCC CGTACGCCGG CGCGCCGCGG CCCGACCTGA TCCTGCTCGA CCTGAACCTG CCCCGCCGGG ACGGGCGGCA GGTGCTGGCC GAGGTCAAGG CGGACGAGCG GCTGCGGCGC ATCCCCATCG TTGTGCTGAC CACCTCGGAG GCGGAGGAGG ACGTGCTGCG CAGCTACGAC CTGCACGCCA ACGCCTACAT CACCAAGCCC GTGGACTTCG AGCGGTTCGT GGCGGTTGTG CGCCAGATCG ACGACTTCTT CATCACCGTC GCCCGGCTGC CCGCGCAGTA G
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Protein sequence | MTEPVVPVEV LLVEDDPGDV LMTREAFEDH KLKNNLNVVS DGVEALAYLR GEGPYAGAPR PDLILLDLNL PRRDGRQVLA EVKADERLRR IPIVVLTTSE AEEDVLRSYD LHANAYITKP VDFERFVAVV RQIDDFFITV ARLPAQ
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