| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6501 |
|---|
| Symbol | |
|---|
| ID | 5674816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7905379 |
|---|
| End bp | 7908762 |
|---|
| Gene Length | 3384 bp |
|---|
| Protein Length | 1127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641245349 |
|---|
| Product | pyruvate carboxylase |
|---|
| Protein accession | YP_001510744 |
|---|
| Protein GI | 158318236 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1038] Pyruvate carboxylase |
|---|
| TIGRFAM ID | [TIGR01235] pyruvate carboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.697042 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCAAGG TACTGGTGGC AAACCGCAGT GAGATCGCGG TTCGGGTGTT CCGGGCCGCG
CACGAGCTCG GGTTGCGGAC GGTGGCTGTC TACACCCCCG AGGATGTCTC CGCGCTGCAC
CGCACGAAGG CGTCCGAGGC CTACGAGCTG TGCGAGCCGG GTCATCCGGT GCGTGGCTAC
CTCGACATCG ACGCGTTGTT GCGGGTCGCC AAGCAGGCGG ACGCCGACAC GCTGCACCCG
GGTTACGGGT TCCTGTCGGA GTCGGCGGTG CTGGCGGAGG CATGCGCGGC GGCTGGCGTG
ACGTTCGTCG GCCCGCCGCC GGCTGTGCTG CGGCTGACGG GTGACAAGGT GGCGGCCCGT
AACGCGGCGA TCGCCGCGGG GCTGCCGGTG CTGCGGGCCT CGGAGCCGCT GCCGGACGGC
GTCGGCGCGC AGGAGGCCGC GGCCGAGGTC GGGTTCCCGC TGTTCGTGAA GGCGTCGGCG
GGTGGTGGCG GGCGCGGGCT GCGCCGGGTG CTGCGTCCGG AGGACCTCGC GGAGGCGGTG
GCGAGTGCGT CGCGTGAGGC GGCGGCCGCG TTCGGGGACG GCACGGTCTT CCTGGAGCAG
GCGGTGGAGC GGCCGCGTCA TGTCGAGGTG CAGGTCTTCG CCGACGGCTA CGGGAACGTG
ATCCACCTGT TCGAGCGGGA CTGCTCGGTG CAGCGCCGGC ACCAGAAGGT CGTCGAGATC
GCCCCGGCGC CGGCGCTGGA CGAACCGATC CGCGACGCCC TGTGCGAGGC CGCGGTGCGC
TTCGCCCGTC ACGTCGGCTA TGTGAACGCC GGGACGGTGG AGTTCCTCGT CGGGGCCGAC
GGCGCGTTCA CGTTCATGGA GATGAACCCG CGCATCCAGG TCGAGCACAC GGTGACCGAG
GAGGTCACCG GTGTCGACAT CGTCGCCGCG CAGCTGCGGG TCGCCGCCGG GGAGAGCCTG
ATCGACCTGA ACCTCACCCA GGACGCGATC GCTCTTCGGG GCACCGCGAT CCAGTGCCGG
GTGACGACCG AGGATCCCTC GGACGGCTTC CGCCCCGACA CCGGGACGAT CACCTTCTAC
CAGTCGCCGG GCGGGCCCGG GGTCCGCCTC GACGGTGCCA CCTACCCGGG GGCGGAGGTC
AGCCCGTACT TCGACTCGCT GCTGGTGAAG CTGACCGCGC GTGGTTCGAC GCTGGAGAAG
GCGTCCCGGC GCGCCCGGCG GGCGCTGGGC GAGTTCCGGG TCCGCGGCGT GCGCACCAAC
ATCGAGTTCC TCGGCCGGCT GCTCGAAGAC CCCGACTTCC TGGCCGGCGG GGTCACGACC
TCGTTCATCG ACGAGCGCCC CGGCCTGGTG AACGCCCTCG ACGACGGGGA CGCGACGAGC
CGCATGCTGG CCCGGCTGGC GGAGAGCACG GTGAACGGGC ACGCCCGCCC GGCGGGGGTG
GCTCTGACGG AGCCGCGCAC GCTGCTCCCG CCGCTGCACC CGACCGACAC CCCGGCGGCC
GGGTCGCGTC AGCTCCTGAC CGAGCTGGGG CCGGCCGGGT GGGCGGCGGA CCTGCGGGGG
CGGACGGCGC TGGCAGTCAC CGACACCACG CTGCGTGACG CGCACCAGTC GTTGCTGGCG
ACCCGGCTGC GCAGCTTCGA CATCCTGGCC GCCGCGCCCG CGCTCGCCGA GCTCACCCCG
AACCTGCTGA GCCTGGAGTG CTGGGGTGGG GCCACCTACG ACGTCGCGTT GCGCTTCCTC
GCCGAGGACC CGTGGGAGCG CCTGACGGCG GTGCGGGCGG CGGTGCCGAA CATCTGCCTG
CAGATGCTGC TGCGCGGGCG CAACGCCGTC GGCTACACCC CCTACCCGGA CGACGTCGTG
CGCGCGTTCG TCGCCGAGGC GGCGGCCGCC GGGCTCGACA TCTTCCGGAT CTTCGACGCG
CTCAACGACA TCGAGCAGAT GCGCCCGGCG ATCGCCGCCG TGCTGGAGAC GAACGCCGTC
GCCGAGGGCA CCCTGTGCTA CACCGGCGAC CTGACCGACC CCGGCGAGCG GATCTACACC
CTCGACTACT ACCTGCGCCT GGCCGACCAG CTCGTGCAGG CCGGCGTGCA CGTGTTGGCG
ATCAAGGACA TGGCCGGGCT GCTGCGCCCG GCCGCCGCCC ACGCGCTGGT CGCCGCGCTG
CGGGAGCGCT TCGACGTACC CGTCCACCTG CACACCCACG ACACCGCCGG TGGTCAGCTC
GCCACCCTGA TCGCGGCCAA CGAGGCCGGG GTGGACGCCG TCGACGCGGC GGCCGCGCCG
ATGTCCGGCG GCACCAGCCA GCCGAACCTC TCCGCCCTGG TCGCCGCCAC CGACCACACC
CCGCGGGCCA CCGGCATCCG GCTCGGCGCG CTGTCGGCGA TGGAGTCGTA CTGGGAGGCC
GTGCGCGATC TCTACTCGCC GTTCGAGGCC GGGCTGCGCG CGCCGACCGG CGCGGTGTAC
CGGCACGAGA TCCCCGGCGG GCAGCTCACC AACCTGCGCC AGCAGGCCAT CAGCCTCGGC
CTCGGCGACC GCTGGGCCCA GGTGACCGAG TGCTACGCCG TGGCGAACGA CCTGCTCGGC
AAGCCGATCA AGGTCACCCC GACCAGCAAG GTCGTCGGTG ACCTGGCGCT GTTCATCGCC
GGCGGCTCGG TGGACGTCGA CCGGCTGCGT GAGCATCCCG AGGAGTACGA CCTGCCCGCC
AGCGTCCTGG GCTACCTGGC CGGCGAACTC GGCACACCCC CGGCCGGCTT CGCCGAGCCG
TTCCGGGAGC GGGCGCTGGC CGGCCGCCGT CCCGAGCCGC CCGCGGCCAC CCTCGCCACC
GAGGACGCCG CCGCGCTGGC CGAGCCCGGC GCCGGCCGGC GGGCGGCGCT GTCCCGGCTG
CTGTTCCCCG GCCCGTGGAA GGACTACCGC AAGGCCGTCG CCACCTACGG CGACTCCTCG
GTGATCCCCA CCGAGGCGTT CCTGTTCGGC CTGGTCCCCG GCCGCCCGGC GAGCGTCATG
CTCGAACCCG GAGTCGAGAT CATCGTGACG CTGGAGACGG TGGGCGAGCC GGACAGCGGC
GGCATGCGCA CCCTCTACCT GCGGGTCAAC GGCCAGCCCC GCCCGGTTCG GGTCCGCGAC
AACTCGATCA AGGCGACGGC CACCGCGGCC CGGCGCGCCG ACCCGTCCGA CCCCACCCAC
GTCGGCGCCG GCCTGCCCGG GATCGTCACC TTCGCCGTCG CGGCCGGCGA CGAGATCGAG
AAGGGCCAGA AACTCGCCGT GGTCGAGGCC ATGAAGATGG AGGCCGCGGT CACCAGCCCG
GCCGCCGGGA AGATCGCCGA ACTCGTCCGC TCCAGCGGCG AATCCGTAGA GGTCGGCGAC
CTCCTCCTGA TCCTGCGCCC CTGA
|
|---|
| Protein sequence | MRKVLVANRS EIAVRVFRAA HELGLRTVAV YTPEDVSALH RTKASEAYEL CEPGHPVRGY
LDIDALLRVA KQADADTLHP GYGFLSESAV LAEACAAAGV TFVGPPPAVL RLTGDKVAAR
NAAIAAGLPV LRASEPLPDG VGAQEAAAEV GFPLFVKASA GGGGRGLRRV LRPEDLAEAV
ASASREAAAA FGDGTVFLEQ AVERPRHVEV QVFADGYGNV IHLFERDCSV QRRHQKVVEI
APAPALDEPI RDALCEAAVR FARHVGYVNA GTVEFLVGAD GAFTFMEMNP RIQVEHTVTE
EVTGVDIVAA QLRVAAGESL IDLNLTQDAI ALRGTAIQCR VTTEDPSDGF RPDTGTITFY
QSPGGPGVRL DGATYPGAEV SPYFDSLLVK LTARGSTLEK ASRRARRALG EFRVRGVRTN
IEFLGRLLED PDFLAGGVTT SFIDERPGLV NALDDGDATS RMLARLAEST VNGHARPAGV
ALTEPRTLLP PLHPTDTPAA GSRQLLTELG PAGWAADLRG RTALAVTDTT LRDAHQSLLA
TRLRSFDILA AAPALAELTP NLLSLECWGG ATYDVALRFL AEDPWERLTA VRAAVPNICL
QMLLRGRNAV GYTPYPDDVV RAFVAEAAAA GLDIFRIFDA LNDIEQMRPA IAAVLETNAV
AEGTLCYTGD LTDPGERIYT LDYYLRLADQ LVQAGVHVLA IKDMAGLLRP AAAHALVAAL
RERFDVPVHL HTHDTAGGQL ATLIAANEAG VDAVDAAAAP MSGGTSQPNL SALVAATDHT
PRATGIRLGA LSAMESYWEA VRDLYSPFEA GLRAPTGAVY RHEIPGGQLT NLRQQAISLG
LGDRWAQVTE CYAVANDLLG KPIKVTPTSK VVGDLALFIA GGSVDVDRLR EHPEEYDLPA
SVLGYLAGEL GTPPAGFAEP FRERALAGRR PEPPAATLAT EDAAALAEPG AGRRAALSRL
LFPGPWKDYR KAVATYGDSS VIPTEAFLFG LVPGRPASVM LEPGVEIIVT LETVGEPDSG
GMRTLYLRVN GQPRPVRVRD NSIKATATAA RRADPSDPTH VGAGLPGIVT FAVAAGDEIE
KGQKLAVVEA MKMEAAVTSP AAGKIAELVR SSGESVEVGD LLLILRP
|
|---|
| |