Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6484 |
Symbol | |
ID | 5674799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7883048 |
End bp | 7883575 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641245332 |
Product | DoxX family protein |
Protein accession | YP_001510727 |
Protein GI | 158318219 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0570836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.12907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTCGC CCGACACCGC GGCGCTCATA TTCAGAATCA TCGTCGGCCT CACGCTGGTC GCCCACGGCT ACAACCACGT CTTCGGGCCC GGCGGGATCC AGGGCACCGC GGGCTGGTTC TCGAGCATGG GCCTGCGGCC CGGCATCGTG CATGCCTGGA CGTCCGGCCT GGTGGAGATC GCGGCCGGCT TCGGGCTCGC CTTCGGCTTC CTGAACTCGT TCAGTGCCGG TGCGATCATG GGGACGATGG TGGTCGCCGG GATCACCGCG CACCGCAAGA ACGGCTTCTT CATCTTCAAG CCGGGCCAGG GCTACGAGTA CGTGCTCATG ATCGCGGTCC TGTGCCTGGG AATCGCCATC CTCGGCCCGG GCAAGGCCTC GCTCGACCAC GCGATCGGGA TCGACGACGA CCTCAACGGC TGGGTGGGCG CGATCATCGC CCTCGTGCTG GGAGTCGGCG GCTCGGCTGG CCTCCTTGTG ACCTCGTGGC GCCCGAACAA GCCGGCATCC ACGACGCCGG CGTCCTGA
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Protein sequence | MTSPDTAALI FRIIVGLTLV AHGYNHVFGP GGIQGTAGWF SSMGLRPGIV HAWTSGLVEI AAGFGLAFGF LNSFSAGAIM GTMVVAGITA HRKNGFFIFK PGQGYEYVLM IAVLCLGIAI LGPGKASLDH AIGIDDDLNG WVGAIIALVL GVGGSAGLLV TSWRPNKPAS TTPAS
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