Gene Franean1_6484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6484 
Symbol 
ID5674799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7883048 
End bp7883575 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content68% 
IMG OID641245332 
ProductDoxX family protein 
Protein accessionYP_001510727 
Protein GI158318219 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0570836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.12907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCGC CCGACACCGC GGCGCTCATA TTCAGAATCA TCGTCGGCCT CACGCTGGTC 
GCCCACGGCT ACAACCACGT CTTCGGGCCC GGCGGGATCC AGGGCACCGC GGGCTGGTTC
TCGAGCATGG GCCTGCGGCC CGGCATCGTG CATGCCTGGA CGTCCGGCCT GGTGGAGATC
GCGGCCGGCT TCGGGCTCGC CTTCGGCTTC CTGAACTCGT TCAGTGCCGG TGCGATCATG
GGGACGATGG TGGTCGCCGG GATCACCGCG CACCGCAAGA ACGGCTTCTT CATCTTCAAG
CCGGGCCAGG GCTACGAGTA CGTGCTCATG ATCGCGGTCC TGTGCCTGGG AATCGCCATC
CTCGGCCCGG GCAAGGCCTC GCTCGACCAC GCGATCGGGA TCGACGACGA CCTCAACGGC
TGGGTGGGCG CGATCATCGC CCTCGTGCTG GGAGTCGGCG GCTCGGCTGG CCTCCTTGTG
ACCTCGTGGC GCCCGAACAA GCCGGCATCC ACGACGCCGG CGTCCTGA
 
Protein sequence
MTSPDTAALI FRIIVGLTLV AHGYNHVFGP GGIQGTAGWF SSMGLRPGIV HAWTSGLVEI 
AAGFGLAFGF LNSFSAGAIM GTMVVAGITA HRKNGFFIFK PGQGYEYVLM IAVLCLGIAI
LGPGKASLDH AIGIDDDLNG WVGAIIALVL GVGGSAGLLV TSWRPNKPAS TTPAS