Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6482 |
Symbol | |
ID | 5674797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7880661 |
End bp | 7881179 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641245330 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001510725 |
Protein GI | 158318217 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.618469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.143744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCAGC GATACCCGGG ACCGAGACGG CCGGCCGAGG AGACCGACCC CGGCCGCGCG CGGCCCGTAG CAGACCTGTC GACACACCCC GGACAGCTTG CCCGCCGTCT GCAGCAGGTC ACATATCAAC TGTGGACCGC CACTGTGTCC ACCGAGACAA CCCCGCCACA GTTCGTGGTT CTCAACAGCC TGCTCGCCGA CCCCGACATC GACCAGCGCA CGCTGGGCGA ACGGGCGTCG CTGGACCGCT CCACCGTCGC CGACGTGGTC GCGCGACTGG TGCAGCGGGG GCTGATCCGC CGCGTGCGCG ATCCCCGTGA CGGCCGCCGC AACGTACTGC GGCTCACGCA GCGCGGCGAA TCGACGCACA GCCATGTCGC TGGGCGGGTG GAGCGGATGA ACGACCTCCT GCTCTCCCCG CTCTCGGCGG ACGAACGCAC CGCCCTGCTC TCCATGCTGA CGCGGATCGT CGAGTCCGTG CCGGCGATCT CGGCGGCCGA GGGGAACGCC GCCGTCTGA
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Protein sequence | MNQRYPGPRR PAEETDPGRA RPVADLSTHP GQLARRLQQV TYQLWTATVS TETTPPQFVV LNSLLADPDI DQRTLGERAS LDRSTVADVV ARLVQRGLIR RVRDPRDGRR NVLRLTQRGE STHSHVAGRV ERMNDLLLSP LSADERTALL SMLTRIVESV PAISAAEGNA AV
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