Gene Franean1_6476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6476 
Symbol 
ID5674791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7873260 
End bp7874450 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content77% 
IMG OID641245324 
ProductL-asparaginase II 
Protein accessionYP_001510719 
Protein GI158318211 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4448] L-asparaginase II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0461805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCCGC CGGTGGTCGC GTGGATCGAG CGCGACACCG CCACCGACCG CGACACCGAC 
CGCGACACCG ACACCGACAC CGGGATGGCC ACGGTTCTGG TCGAGAGCCG GATCAGGGGG
ACCGTCGTCG GGCTGGACCC GGCCGGCGCG GTGGTGCTGT CGGTCGGCGA CCCGACCGCG
GTGATCTCCC CGCGGTCCAC GGTGAAGCCG ATGCAGGCCG TCGGGATGCT GCTCGCCGGG
CTCGACGCGG CGTTCGGCTC CGGTGCAGGC GCCGCTTCCC GTGCTGCCGC CGTTTCCGGT
GCGGGCGATC CCGCTTCCGG CGTCGGAGAT TCCGACTCCG GCCATCCCGA CTGCGGGGCC
GCCTCCGAAC GGGGCGGCGG AATCCCGTCC GAGCTGCTGG CGATCGTGTC CTCCTCGCAC
AGCGGTGAGC CCGAGCAGCT GGCGGCCGTG CGGGCCGTGC TCGCGGCGGC CGGGCGCGGC
GAGGACGCCC TGGCCTGCCC CGCCGACCTC CCCATCGGGC GGCTCGCCCA CGAGCGGCAC
CTGGCCGCCG GCGGCGGGCC CGAACGGCTG TTGATGAACT GCTCCGGCAA GCACGCCGGG
ATGATCGCCA CCTGCGTCGC GGCCGGGTGG CCGGTGGCCG GCTACACCGA CCCGGCGCAT
CCGCTGCAGC GCCGGATCCG GGCCGTGATC GAGGAGCTCA CCGGTGCCAC GATCACGTCC
ACCGCGGTGG ACGGCTGCGG TGCCCCGCTG TTCGGCATCC CGCTGCTCGG CCTCGCCCAC
GGGATGCGCG AGATCGCCCT CGCCGCCGCC GGCCCGCGCT CGCCTCGGCA GCGCGTCGCG
GCGGCGATGC GGGCCTTCCC GGCCCTCATC GGCGGTCCGG GGCGACCGGA CACGGAGCTG
ATGCTCGCCG CCCCGTGGAT CATCGCGAAG GACGGCGCCG AGGGGGTCAC CGTCGCGGCG
ACGGCGGCGG GGTACGCGGT GGCGGTCAAG ATCGAGGACG GCTCCCAGCG TGCGGCTATG
CCAGTCCTGG TCACCGCGCT GCGCCGCATC GGCGCGCTCG ACCCCACCCC GGGCCCGGGC
GCCGCCGTGG GCCTGGATGC CGGCAGGCTC GACGCCCTGG CCGCTCCCGC GGTGCTCGGT
GGCGGGGTGC CGGTCGGTCG GCTGCGCCCG TTCCTGCCGT CCGCCCCCTG A
 
Protein sequence
MAPPVVAWIE RDTATDRDTD RDTDTDTGMA TVLVESRIRG TVVGLDPAGA VVLSVGDPTA 
VISPRSTVKP MQAVGMLLAG LDAAFGSGAG AASRAAAVSG AGDPASGVGD SDSGHPDCGA
ASERGGGIPS ELLAIVSSSH SGEPEQLAAV RAVLAAAGRG EDALACPADL PIGRLAHERH
LAAGGGPERL LMNCSGKHAG MIATCVAAGW PVAGYTDPAH PLQRRIRAVI EELTGATITS
TAVDGCGAPL FGIPLLGLAH GMREIALAAA GPRSPRQRVA AAMRAFPALI GGPGRPDTEL
MLAAPWIIAK DGAEGVTVAA TAAGYAVAVK IEDGSQRAAM PVLVTALRRI GALDPTPGPG
AAVGLDAGRL DALAAPAVLG GGVPVGRLRP FLPSAP