| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6473 |
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| Symbol | |
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| ID | 5674788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7868252 |
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| End bp | 7869970 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641245321 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001510716 |
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| Protein GI | 158318208 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0459133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGT CCACGCCGAC GGCGGTGCCC TCGGGCACGA GCCTCGGCCG GCTGGCCGAG
CTGTCCATCG AGCGGACCGG CGGCACCGGT CCGCTGATCT TCGAGGAGCG GCGCTGGACG
GCCGCGCAGC TCGCGGCCCG GGCCCGGCGC CTGGCCGGCG GGCTGCGCGC GGCCGGGCTC
GTGCCGGGGG ACAGGGTCGC GGTCTGCATG GCGAACTGTC CCGAGGTCGG CATCACCTAC
CAGGCGGCCT GGTGGGCCGG CGCGGCCGTC ACGCCGGTGC TGTTCCTGCT CGGGGAGACG
GACCTGCGTC ACGTGCTGGC CGACAGCGCC GCCTCGTTCG TCGTGACCAC CCCGGACTTC
CTGGACAAGG TCCGCGCGGC GGCCCGGGGC CTGCCCGCGC TGCGTGCCGT CGTGCTGGCC
GAGCAGGCCG AGCCCGCGCC CGCCGACCGT GCCGGGCCAC CTGTGCTGTT GTTCGCCGAG
CTGGAGTCCG CGGCCGAGTC CGACCTGGTG GACGTCGACC CGTCCGGTAT GGCCGCGCTG
CTCTACACCG GGGGGACGAC GGGGCGCGCC CGGGGCGTGG TGCTCTCCCA TGACAACGTC
TCGGCGGCCG CGTGGGCGGT GCACTCGATG CGGTTGGGCG AGGGCCTGCC CGGCCTGCTG
CCCCTGCCGA TGTCGCATGT CTACGGGATG ACCGTGAGCG TCATGGCCAC CTACGCCGAG
ACGCCGGCGA CGGCTGTCCT GATGCGCTGG TTCGAGCCCG TCCGGTTCCT GGAGCTGGTG
GTGGAGCACC AGGTGGCGCA GACGGCGATC GTCCCCGCCA TGGCCCGGAT GATCCTGGAC
CAGGATCTCG ACGGCTACGA CCTGTCGGCG CTGCGCCAGG TGGTCTCCGG GAGCTCGGCG
CTGCCGCGTG AGGTGGCCGA CGAATGGGCG CGCCGGCTGC CCGGGGTCGA GCTCGTGGAG
GGCTACGGCT GCACCGAGGC GTCGGCGATC GTCACGGTGA TGCCACCGGG GCGGACCCGG
CTGGGCAGCG TCGGCCGCCC GGCACCCGGC GTCGAGCTCC GGATCGAGGC CCTGAACGCC
GCCGACGGCT ACCATGACGG CCCGCCCGGG GAAGCGGGTG GTTCGCCGGT CGGGGAGATC
TGCGTGCGCG GGCCGGGCGT CATGCTGGGC TACTGGCGTG ATCCTGCGGC GACCGCGCAG
GCGGTCCGCG CCGGATGGCT GCACACCGGC GACGTCGGCC GCCTTGACCG GGACGGCTTC
CTGTACCTAG TCGACCGGAT GAAGGATCTG ATCATCCGAG GCGGGTTCAA CATCTACCCG
CGGGACGTCG AGGACGCGCT GCGGGAGCAC CCGGACATCG CCGAGGTGGC CGTGATGGGC
CGCCCCGACC GCCGGCTCGG CGAGGAGATC GTCGCGTTCG TCCAGCTCGG CCTGGGCACG
GACGTCTCGG CGGAGGCACT TGTCCGGTTC GGGCGGGAGC GGCTCGGGCC GCTGCGGTAC
CCGCGTGAGG TGCGGATCGT CCTGGCGATC CCGCTCACCA GCATGCTCAA GACAGACCGG
GCGGCCCTGC GGGCGATGCT CACGCCGTCA GTTCCGCCGG CTTCGCTGGC GCCGTCGGCG
CACGGCTCGT CACCCTCGTC GCCCCGGTCG CCAGGGAATT CCGACTCCGT CGCGCGGCAC
GGCGGGCCTG TTGGACCGGT GCCGCGAGTT TCGTCGTAG
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| Protein sequence | MIASTPTAVP SGTSLGRLAE LSIERTGGTG PLIFEERRWT AAQLAARARR LAGGLRAAGL
VPGDRVAVCM ANCPEVGITY QAAWWAGAAV TPVLFLLGET DLRHVLADSA ASFVVTTPDF
LDKVRAAARG LPALRAVVLA EQAEPAPADR AGPPVLLFAE LESAAESDLV DVDPSGMAAL
LYTGGTTGRA RGVVLSHDNV SAAAWAVHSM RLGEGLPGLL PLPMSHVYGM TVSVMATYAE
TPATAVLMRW FEPVRFLELV VEHQVAQTAI VPAMARMILD QDLDGYDLSA LRQVVSGSSA
LPREVADEWA RRLPGVELVE GYGCTEASAI VTVMPPGRTR LGSVGRPAPG VELRIEALNA
ADGYHDGPPG EAGGSPVGEI CVRGPGVMLG YWRDPAATAQ AVRAGWLHTG DVGRLDRDGF
LYLVDRMKDL IIRGGFNIYP RDVEDALREH PDIAEVAVMG RPDRRLGEEI VAFVQLGLGT
DVSAEALVRF GRERLGPLRY PREVRIVLAI PLTSMLKTDR AALRAMLTPS VPPASLAPSA
HGSSPSSPRS PGNSDSVARH GGPVGPVPRV SS
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