| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6470 |
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| Symbol | |
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| ID | 5674785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7864485 |
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| End bp | 7866359 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641245318 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001510713 |
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| Protein GI | 158318205 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0566058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGG AGGCGGTGGT GGCCGAGGCG GTGGTGGCGG ACACCGCCAG CCCCGATCCG
CCGCGGGACG ACGAGGAACA CGCAGAGGAA CACACAGAGC TGGACGACCT GCTGCGGGCC
GTGGCCCGGG AGGGCTTCGG GTTCGCCGAG CTGCGTCCCG GCCAACTCGA GGCGATGCGG
GCCGTCACCG CCGGCCGGGA CATGCTGTGC GTCCTGCCGA CCGGGGGTGG CAAGTCGGCC
GTTTACCAGA TTCCGGCCCT GCTCACGGCG GGGCCGACCG TGGTCGTCTC GCCGCTCATC
GCGCTGCAGC GCGACCAGGT GCGCGGGCTC ACCGAACGCC TGGGCGGCCT GCTGGACGCG
GTGCCCGCCG GCCCCGGGAC CGCCGCCAGA CCCGACGCCG GCCAGTCCGG TGCGCGTCAG
CCTGACGCTG ACGCGCCCGC GGTGGCGGCG AACTCGCAGA GCGGGCGCGG CGCGGCGCTC
GCGGCGATCG ACGCCGTCCG CCACGGCCGG GCCGAGTTCC TGTTCCTTGC TCCCGAGCAG
CTCGCCCGCG ACGACGTCCG GGAGGCGCTT CGCGAGGCGC GGCCCTCCCT GTTCGTCGTG
GACGAGGCGC ACTGCATCTC CAGCTGGGGC CACGACTTCC GCCCCGACTA CGCCCGCCTG
GGCCAGGTGA TCGACGACCT CGGCCATCCG GTGGTCGTCG CGCTGACAGC CACCGCGTCG
CCGCCGGTGC GCCGGGAGAT AGCCGAGCGC CTGCGGCTCG AGGATCCGGC GGAGATCGTC
CGCGGCTTCG ACCGCCCGGA GATCACCCTG AGTGTCGAGT CGTTCGTCGA CGACGACGAG
AAGAAGGCCC GGCTGGTCGA GCGGATCGCC GCCGAGACCA AGCCCGGCCT GGTCTACACG
GCGACCCGGC GTGGCGCCGA GGATCTCGCC GCCGAGCTCG CGGACCTCGG GCTCACCGCG
AGCGCGTACC ACGCCGGGCT ACGCGCGGCG CGCCGCCGTG AGGTCGAGGA GGACTTCATG
GCCGACCGGT GCGACGTCGT CGTGGCGACG ACCGCGTTCG GCATGGGCAT CGACAAGCCC
AACGTCAGGT TTGTGATCCA CGCCGAGGTG GCCGACTCGA TCGACTCCTA CTACCAGGAG
ATCGGACGCG CCGGCCGCGA CGGCCAGCCG GCGGTCGCGG TCCTGTTCTA CCGGCCCGAG
GACCTGGGCC TGCGTCGCTT CTTCGCCTCG TCACGCCCGG ACGAGACCGC CCTGCGCCGC
GTCGCCGTGC TGCTCGGCCA CGCCGAGGAA CCGGTGAGCG CGCGCGCCCT GGCCGACGCC
GCCGGGGTCG GCGACACCGC GCTGACCCGC ATGGTGGACC TGCTCGAACG GGCCGACGCG
GTCACCGTCC ACGACGACGG CCGCATCGAG CGCAGTGCCG GTGCGCCGGA ACCCGAGCAG
GCCGCGGGCC GCGCCGTCGA ACTGGCCGCG GCGCGGGTCG AGTTCGAGCG GTCGCGGGTC
GACATGATGC GCGGGTACGC GGAGACCCGC GACTGCCGGC GGCGTTACCT GCTCGCCTAC
TTCGGCGACA CGTCCCCCGC CGCCTGCGGG AACTGTGACG TGTGCCGGTC CCGTCTGCCC
GGGCAGCGGG TGCCGGGCGG CGAGGGCGGG GCCGCGGCCG CCGCCGGTTC CCCGGCGCCG
GTGGGCGACA ACGAGGCCAC GGCGGAGGTC TCGCCGTTCC CGGCCGGGCT GGCCGTCCGT
CATGTGCGGT GGGGGCCCGG CCAGGTGATG AAGGAGGACG GCGACCGCAT CACCGTCCTG
TTCGACGAGG TCGGATACCG CACGCTGTCG GTGGCGGCGG TGACCGAGCG GGGCCTGCTG
GCGGTCGCCG ACTAG
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| Protein sequence | MPEEAVVAEA VVADTASPDP PRDDEEHAEE HTELDDLLRA VAREGFGFAE LRPGQLEAMR
AVTAGRDMLC VLPTGGGKSA VYQIPALLTA GPTVVVSPLI ALQRDQVRGL TERLGGLLDA
VPAGPGTAAR PDAGQSGARQ PDADAPAVAA NSQSGRGAAL AAIDAVRHGR AEFLFLAPEQ
LARDDVREAL REARPSLFVV DEAHCISSWG HDFRPDYARL GQVIDDLGHP VVVALTATAS
PPVRREIAER LRLEDPAEIV RGFDRPEITL SVESFVDDDE KKARLVERIA AETKPGLVYT
ATRRGAEDLA AELADLGLTA SAYHAGLRAA RRREVEEDFM ADRCDVVVAT TAFGMGIDKP
NVRFVIHAEV ADSIDSYYQE IGRAGRDGQP AVAVLFYRPE DLGLRRFFAS SRPDETALRR
VAVLLGHAEE PVSARALADA AGVGDTALTR MVDLLERADA VTVHDDGRIE RSAGAPEPEQ
AAGRAVELAA ARVEFERSRV DMMRGYAETR DCRRRYLLAY FGDTSPAACG NCDVCRSRLP
GQRVPGGEGG AAAAAGSPAP VGDNEATAEV SPFPAGLAVR HVRWGPGQVM KEDGDRITVL
FDEVGYRTLS VAAVTERGLL AVAD
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