Gene Franean1_6461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6461 
Symbol 
ID5674776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7855359 
End bp7855784 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content70% 
IMG OID641245309 
Producthypothetical protein 
Protein accessionYP_001510704 
Protein GI158318196 
COG category[S] Function unknown 
COG ID[COG4911] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0167384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGTCG GTGCCACCCG GCTGGGCCCG TTGACGTCCA GGCATGATGG ACTGGACTAC 
GTGGACCAGA TGTTCTCCGT GGACGAGGCC CGTGCCCTCA TGCCCGAAAT CCACGAACGC
GCCGCCGAGT TCGTCGCACG GCGGGCGGAC CTCACCGAGC TGAGCGCCGC GCTGGCGGAT
GGCGCGTCGT CCCCCAAAGG GGGACTCGCC GAGATGAAAG CCCTGCAGGC CTGGCTGTCC
GAAGCGCTGG CCTGGTTCCC CGCCCGCGGC ATCCAGGTCA AGGGCGCCGC CCCGCTACTG
ATCGATTTCC CCGCCATCCT CGATGGCGAG AACGTGCTGC TGTGCTGGAT CGAGGGCGAG
CCGGATCTCG CCTGGTACCA CCGGGCCGAC CTTGGCTTCG CCGGCCGCCG CCCCCTTCCC
AGCTGA
 
Protein sequence
MPVGATRLGP LTSRHDGLDY VDQMFSVDEA RALMPEIHER AAEFVARRAD LTELSAALAD 
GASSPKGGLA EMKALQAWLS EALAWFPARG IQVKGAAPLL IDFPAILDGE NVLLCWIEGE
PDLAWYHRAD LGFAGRRPLP S