Gene Franean1_6455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6455 
Symbol 
ID5674770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7848806 
End bp7849756 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content71% 
IMG OID641245303 
Productmethyltransferase type 11 
Protein accessionYP_001510698 
Protein GI158318190 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00745461 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCGTCG TGAACATCTC CACCTCCGAG ATCGACGCCC GCGAGAACGA CAGCGCCGAG 
CACGGCGCCC ACGCTGGGCA CCACGAGCAC GATGAGCACG GTGAGCACTG CGAGCACGGT
GAGCACGACG GGGACGGGCA CGACGAGCAG GGCGCCCGGC CCGCGTACGG GTACACCGAG
ATCGACTCCG CCGGCGCCCG CGCCGCGAAC CGGCACTACT GGGATTCCGA AGCCCCCTCC
TACTACGCCG AGCACGGCGA CTTCCTGGGC GACGTCGACT TCTGCTGGAG CCCGGAGGGG
CTGCGCGAGT CCGAGGCGCG GCTGCTCGGG GACGTTGCCG GCCGGGTGGT CCTGGAGGTC
GGCTGCGGCG GGGCGCAGTG CTCGCGGTGG CTGGCCGGGC AGGGCGCGAC CGTCGTCGCC
ACCGACCTGT CGGCGGGCCA GCTCGCGCAG GCGCGCGCGC TGAACGACCG CACCGGAGTG
TCGGTTCCGC TGTTCCAGGC CGACGCGATC ACGCTGCCGG TGCGCTCGGA GAGCGTCGAC
ATCGCCTGTT CGGCGTTCGG CGCCGTCCCG TTCGTCACCG ACAGTGCGGC GCTGATGCGG
GAGGTCGCCC GGGCCCTGCG GCCCGGCGGC CGCTGGGTCT TCTCGACCAC CCACCCCTTC
GTGTGGTGCC TGCCGGACGC CCCCGACGCC AATGGGCTAG TCGTCTTCCA CAGTTACTTC
GACCGCCGGG CGTACACGGA GCACTCCGAG ACCGGCGAGC CGACCTACAT AGAGGCACAC
CGGACGATGG GCGACCGCGT ACGCGAGATC ATCGCCGCCG GCCTGGTACT ACTCGACGTC
ATCGAGCCGG AATGGCCTGA GGGTCACAAC CGGGTGTGGG GCCAGTGGGG ACCCCTTCGG
GGGCAGTTCG TTCCGTCGAC GTCGATCTTC GTCACGGCCA AGCCGGGCTG A
 
Protein sequence
MAVVNISTSE IDARENDSAE HGAHAGHHEH DEHGEHCEHG EHDGDGHDEQ GARPAYGYTE 
IDSAGARAAN RHYWDSEAPS YYAEHGDFLG DVDFCWSPEG LRESEARLLG DVAGRVVLEV
GCGGAQCSRW LAGQGATVVA TDLSAGQLAQ ARALNDRTGV SVPLFQADAI TLPVRSESVD
IACSAFGAVP FVTDSAALMR EVARALRPGG RWVFSTTHPF VWCLPDAPDA NGLVVFHSYF
DRRAYTEHSE TGEPTYIEAH RTMGDRVREI IAAGLVLLDV IEPEWPEGHN RVWGQWGPLR
GQFVPSTSIF VTAKPG