| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6438 |
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| Symbol | |
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| ID | 5674753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7826906 |
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| End bp | 7828912 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641245286 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001510681 |
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| Protein GI | 158318173 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.160303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0428099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGGGCT ATGCCGACGT GCCGCCCGGC AGTCTGCTGG ACGCCGCGCC GGACGCGATC
GTCGGCGTGC GCCCGGACGG GCGGATCGCG CTGGTGAACG CGCAGGCCGA GCGGCTCTTC
GGGTACGACC GGGACGAGCT CGTCGGGCAA CCGATGGAGA TCCTCGTCCC GGAGGCGTTG
CGCGGGGCGC ACCCGGCCCG CCGCGGCGCG TACCTCTCCG ACCCGCGGCC GCGGCCGATG
GGCGCGGGCG TGGAGCTCGC CGCGCGCCGC CGGGACGGCA CGGAGTTCCC CGCCGAGATC
TCGCTGTCGG CCGTCCAGAC CGTCGAGGGC ATCTTCGTCA CGGCCGCGAT CCGGGACGTG
ACGAGCCGCA AGCGGGCCGA GGCCATGTTC CGCGGCCTGC TGGAGGCGGC GCCGGACGCG
ATCGTCGGCG TGCGCCCGGA CGGGCGGATC GCGCTGGTGA ACGCGCAGGC CGAGCGGCTC
TTCGGGTACG ACCGGGACGA GCTCGTCGGG CAACCGATGG AGATCCTCGT CCCCGAGTCG
GCGCGGCACC TGCACCCGCG GCACCGCACC CGCTACTTCG ACGATCCGCG GCCGCGGCCG
ATGGGCGCGG GGATGCAGCT CGCCGCGCGC CGCCGGGACG GCACGGAGTT CCCCGCCGAG
ATCTCCCTGT CCGCGCTGGA GACCGAGGAC GGGCTGCTCG TCTCGGCCGC GATCCGGGAC
GTCACCGACC GGCTGGAGGC GCAGGCGGAG CGCGAGCGGC TGCGGGCCCA AGCGGAGCGG
GAACGGCTCG AGGTACAGCT GCACCAGTCG CAGCGGCTGG AGAGCCTCGG CCAGCTCGCC
GGCGGCGTGG CACACGACTT CAACAATCTG CTCGCAGTGA TCATCAACTA CACGGCCTTC
GTCGGTGAGG TCGTCGGAAC CGCCGCCAGG GACCAGGGCG GCCGGTGGGA GTCCGCCCGC
CGCGACATCG AGCAGGTCCA GCGGGCGGCC GACCGGGCCG CCCAGCTCAC CCACCAGCTG
CTCGCCTTCG GCCGGCGCGA GGTGGTCCAG CCGCGCCCGC TGGACCTCAA CGGGGTCGTC
CACGACATGG AGCAGTTGCT GCGCCGCACC CTCGGCGAGC ATGTGGAGCT GCACACCTCC
GCCCACCCGG GCCTGTGGAC GGTGCTGGCC GACGTGGGCC AGATCGAGCA GGTGCTGGTG
AACCTCGCCG TCAACGCGCG GGACGCGATG CCCGGTGGCG GCACGCTCAC CATCGACACC
TCGAACGTGA GCGTCGACGA CGAGACGGCG GCCGCCCACC CGGGGCTGTG CAGCGGGCGC
TTCGTGCACC TGCGGGTCAG CGACAGCGGG ACGGGCATGT CGCCGGAGGT CGCCGCGCGC
GCGTTCGAGC CGTTCTTCAC GACCAAGACG AAGGGCGAGG GCTCCGGGCT CGGCCTGGCC
ACCGTCTACG GGATCATCAC CCAGGCGGGC GGGCACGTGG AGATCCTGTC GACGGCCAAC
GTCGGCACCA CCGTCAGCGC GCTGCTGCCG GCCGTCGACG GCGCCGTCCC GGCGGCTGAG
GAGCAGCTCG CCGACGGTGA GCTGTTCGGC GGCGAGACGA TCATGGTGGT CGAGGACGAG
CCGGCCATGC GCGAGCTCAC CCGTCGCATC CTTGCCCGCA ATGGCTACCA GGTGATCATC
GCGGCGAGCG GGCCCGAGGC GATCTCGCTG GCGTCGACGA CGCGGGAGGA GATCCACCTG
CTGCTGACCG ACGTGGTCAT GCCGCAGCTG CTCGGCAGCG AGGTCGCCGA GCGGATCCGC
CAGCAGCGGC AGGACCTGCG CGTCCTCTAC ATGTCCGGGT ACGCCCAGCC CGTGCTTGCC
CGGAACGGGA CGCTCGCCCC GGGGCTTGCC CTGCTGACCA AGCCGTTCTC CGAGCGGGTG
CTGCTGTCGA AGGTGCGGGA GGTTCTGGAT TCCCTCAGCG GCCCTTTCTC CCCGCACGGC
GCGCCGCCCT GGCCCCGCGA CAGCTGA
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| Protein sequence | MAGYADVPPG SLLDAAPDAI VGVRPDGRIA LVNAQAERLF GYDRDELVGQ PMEILVPEAL
RGAHPARRGA YLSDPRPRPM GAGVELAARR RDGTEFPAEI SLSAVQTVEG IFVTAAIRDV
TSRKRAEAMF RGLLEAAPDA IVGVRPDGRI ALVNAQAERL FGYDRDELVG QPMEILVPES
ARHLHPRHRT RYFDDPRPRP MGAGMQLAAR RRDGTEFPAE ISLSALETED GLLVSAAIRD
VTDRLEAQAE RERLRAQAER ERLEVQLHQS QRLESLGQLA GGVAHDFNNL LAVIINYTAF
VGEVVGTAAR DQGGRWESAR RDIEQVQRAA DRAAQLTHQL LAFGRREVVQ PRPLDLNGVV
HDMEQLLRRT LGEHVELHTS AHPGLWTVLA DVGQIEQVLV NLAVNARDAM PGGGTLTIDT
SNVSVDDETA AAHPGLCSGR FVHLRVSDSG TGMSPEVAAR AFEPFFTTKT KGEGSGLGLA
TVYGIITQAG GHVEILSTAN VGTTVSALLP AVDGAVPAAE EQLADGELFG GETIMVVEDE
PAMRELTRRI LARNGYQVII AASGPEAISL ASTTREEIHL LLTDVVMPQL LGSEVAERIR
QQRQDLRVLY MSGYAQPVLA RNGTLAPGLA LLTKPFSERV LLSKVREVLD SLSGPFSPHG
APPWPRDS
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