Gene Franean1_6429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6429 
Symbol 
ID5674744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7810404 
End bp7810979 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content72% 
IMG OID641245277 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001510672 
Protein GI158318164 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0556952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.216575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCTG AGCCCCGCAC GGCCGAGCCC GCGGCGGCCG GGTCGCGGGG CGCGCCGCTC 
TCGCTGCGGG CGCAGTTGCG CGAGGACAGG GACGTCCACT ACGGGGCGCG GCTGCACCCG
GGCTACCAGG CGCTCGCCGT CCACCGGTTC GGCCGGTGGT GCCGCGAGCG CGGCGGGCTG
GTCGGCAGGT TCGGCACGAT CGCCTTCAAG GCCGTGAACA ACATCGTCAT CCGCAACCTC
CAGGGCACCG AGATCTCCGT CGACGCCAGC ATCGGACGTC GCGTCCTGAT CGGGCATCAC
CAAGCGGTCA TGATCCCGCG CCACTGCGTG ATCGGCGACG ACACGATCAT CCGGCACGGC
GTCACGATCG GGTACGCCTC GACGGACGCC CCGCCCGATG CCGTCCCGAA GATCGGCGCC
CGAGTCGACA TCGCGCCGGG CGCGCACCTG ATCGGGCCGA TCACGATCGG GGACGACGTG
AAGATCGGAC CTGGCTCGAT CGTCACGACC GACGTCCCGG CGGGTGCCAC CGTCTTCGCC
GCCCCCGCGA GGATCATGCG CCCGCCCGCC GGGTGA
 
Protein sequence
MSAEPRTAEP AAAGSRGAPL SLRAQLREDR DVHYGARLHP GYQALAVHRF GRWCRERGGL 
VGRFGTIAFK AVNNIVIRNL QGTEISVDAS IGRRVLIGHH QAVMIPRHCV IGDDTIIRHG
VTIGYASTDA PPDAVPKIGA RVDIAPGAHL IGPITIGDDV KIGPGSIVTT DVPAGATVFA
APARIMRPPA G