Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6429 |
Symbol | |
ID | 5674744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7810404 |
End bp | 7810979 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641245277 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_001510672 |
Protein GI | 158318164 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1045] Serine acetyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0556952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.216575 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCTG AGCCCCGCAC GGCCGAGCCC GCGGCGGCCG GGTCGCGGGG CGCGCCGCTC TCGCTGCGGG CGCAGTTGCG CGAGGACAGG GACGTCCACT ACGGGGCGCG GCTGCACCCG GGCTACCAGG CGCTCGCCGT CCACCGGTTC GGCCGGTGGT GCCGCGAGCG CGGCGGGCTG GTCGGCAGGT TCGGCACGAT CGCCTTCAAG GCCGTGAACA ACATCGTCAT CCGCAACCTC CAGGGCACCG AGATCTCCGT CGACGCCAGC ATCGGACGTC GCGTCCTGAT CGGGCATCAC CAAGCGGTCA TGATCCCGCG CCACTGCGTG ATCGGCGACG ACACGATCAT CCGGCACGGC GTCACGATCG GGTACGCCTC GACGGACGCC CCGCCCGATG CCGTCCCGAA GATCGGCGCC CGAGTCGACA TCGCGCCGGG CGCGCACCTG ATCGGGCCGA TCACGATCGG GGACGACGTG AAGATCGGAC CTGGCTCGAT CGTCACGACC GACGTCCCGG CGGGTGCCAC CGTCTTCGCC GCCCCCGCGA GGATCATGCG CCCGCCCGCC GGGTGA
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Protein sequence | MSAEPRTAEP AAAGSRGAPL SLRAQLREDR DVHYGARLHP GYQALAVHRF GRWCRERGGL VGRFGTIAFK AVNNIVIRNL QGTEISVDAS IGRRVLIGHH QAVMIPRHCV IGDDTIIRHG VTIGYASTDA PPDAVPKIGA RVDIAPGAHL IGPITIGDDV KIGPGSIVTT DVPAGATVFA APARIMRPPA G
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