| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6413 |
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| Symbol | |
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| ID | 5674728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7786596 |
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| End bp | 7788329 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641245261 |
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| Product | ABC transporter related |
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| Protein accession | YP_001510656 |
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| Protein GI | 158318148 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.637608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.411769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCA GGCTGTTGCG GAACCACCTA CCCCCCTACT CGCGGCCGAT CGCGCTGCTG
GTCGTGCTGC AGCTGACCGC GACCCTGGCC ATGCTCTACC TGCCGACCCT GAATGCCGAC
ATCATCGACA ACGGTGTGGT GCCGGGCGAC ACGGGTTACA TAGTCCGGCT CGGCGGGATC
ATGCTCGGGG TGACCTTCCT GCAGGCCGTC TGCTCGGCCG CGGCGGTGTT CTTCGGCGCG
CGCACCGCGA TGGGAGTCGG CCGCGACATC CGGGCCGCGG TGTTCGACCA GGTCCAGTCG
TTCTCGGCCC GCGAGGTCGG CCGCTTCGGC GCGCCGTCCC TGATCACCCG GGCGACGAAC
GACGTCCAGC AGATCCAGAT GCTGGTGCTG ATGGCGTTCA CCATGATGAT CTCCGCGCCG
ATCATGTGCC TGGGCGGGAT CGCGCTGGCG GTGCACCAGG ACGCCGGCCT CTCGCTGCTG
CTCGTCGCGA TCGTGCCGTT CCTCGCGGCG ATGATCACCC TGCTGGTCCG GCGGATGCAG
CCGCTGGGCC GGAAGATGCA GGAGCGTCTC GACGAGGTCA ACCGCATCCT GCGCGAGCAG
ATCACCGGCC TGCGGGTGAT CCGCGCCTTC GTCCGGGACG ACCACGAGAA GCGCCGTTTC
GGCACCGCCA ACGCCGACCT CACGGACGTC TCCCTGCGCT TCGGTCGGAT CATGGCGCTG
CTGTTCCCGC TGGTGATGGC GGCGGTGAAC GTCTCGAGCA TCGCCGTGAT CTGGTTCGGC
GCGCACCGGA TCGACGATGG TGCGATGGAG ATCGGGGCGC TGACGGCCTT CCTCAGCTAC
CTGATGCAGA TCCTGATGTC GGTCATGATG GCCACCTTCA TGTTCTCGAT GATTCCGCGG
GCCGAGGTGT GCGCGGAGCG CATCCAGGAG GTGCTGGGGA CGGAGTCGAC GCTGCGCCCG
CCCGCCGACC CGGTGCGCAC GCTGCCGCGC CGCGGCGAGC TGGAGCTGCG CGACGTCATG
TTCAGCTACC CGGGTGCCGA GGCGGCGGTG CTGCGCGGGG TCAGCGTGCG CGCTCGCCCC
GGGCGGACCA CCGCGATCAT CGGGAGCACC GGCAGCGGCA AGTCCACGCT GCTCGGCCTG
GTCCCGAGGC TGTCCGACGT CTCCGAGGGC GCCGTCCTGA TCGACGGGGT GGACGTCCGC
GACATCGACC CGAAGCTGAT GGCCGAGACC GTCGCCCTCG TCCCGCAGAA GCCGTACCTG
TTCACCGGGA CGATCGCGTC CAACCTGCGC TACGGGGATC CCGAGGCCAC CGACACCGAG
CTGTGGCGCG CCCTGGACAT CGCCCAGGCC AGGGACTTCG TCGAGGCGAT GCCCGACGGG
CTGGACACCC CGATCGCCCA GGGCGGGACG AACGTCTCCG GCGGGCAGCG CCAGCGGCTC
GCGATCGCCC GGGCGCTGGT CCGGCGTCCG GACATCTACC TGTTCGACGA CTCGTTCTCG
GCGCTCGACT ACGCGACCGA CGCCGCCCTG CGCGCGGCGC TCGCGCGCGA GACGGCCGGT
GCCACGATGG TGATCGTCGC CCAGCGGGTG GCGACCATCC GCGACGCCGA CCAGATCATC
GTGCTGGACG ACGGCCAGGT CGTGGGCACG GGAACCCATC GCGAGCTGCT GGCGGGCAAC
GACACCTACC GGGAGATCGT CTTCTCGCAG CTCACCGAGG AGGAGGCGGC ATGA
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| Protein sequence | MLTRLLRNHL PPYSRPIALL VVLQLTATLA MLYLPTLNAD IIDNGVVPGD TGYIVRLGGI
MLGVTFLQAV CSAAAVFFGA RTAMGVGRDI RAAVFDQVQS FSAREVGRFG APSLITRATN
DVQQIQMLVL MAFTMMISAP IMCLGGIALA VHQDAGLSLL LVAIVPFLAA MITLLVRRMQ
PLGRKMQERL DEVNRILREQ ITGLRVIRAF VRDDHEKRRF GTANADLTDV SLRFGRIMAL
LFPLVMAAVN VSSIAVIWFG AHRIDDGAME IGALTAFLSY LMQILMSVMM ATFMFSMIPR
AEVCAERIQE VLGTESTLRP PADPVRTLPR RGELELRDVM FSYPGAEAAV LRGVSVRARP
GRTTAIIGST GSGKSTLLGL VPRLSDVSEG AVLIDGVDVR DIDPKLMAET VALVPQKPYL
FTGTIASNLR YGDPEATDTE LWRALDIAQA RDFVEAMPDG LDTPIAQGGT NVSGGQRQRL
AIARALVRRP DIYLFDDSFS ALDYATDAAL RAALARETAG ATMVIVAQRV ATIRDADQII
VLDDGQVVGT GTHRELLAGN DTYREIVFSQ LTEEEAA
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