| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6409 |
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| Symbol | |
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| ID | 5674724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7779067 |
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| End bp | 7780803 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641245257 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001510652 |
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| Protein GI | 158318144 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.438631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGTG ATCTGGGCAG CTTGGCGGGT CCGGAGGAGG CAGGGGAACC ACAGGAGGCA
GGGGAGCTAC GAGCGGAAGG GGAAAGGGAA GGGATCCGAG GGGAGCCGGG TGGGCGATCC
GTGCCATCCG GCTCGGCCGG GCCGCCGCAC ACCGGGCTGG TGTTCACGGT GCTCGTGCTC
GGTGGCCTGC TCGTCGTTCT GGATATCACG ATCATCAATG TCGCGATCCG CACGCTGGCG
GCGGATCTCG ATGCTTCACT GCCGGTGATC CAGTGGGTTT CGACGGGATA CACCCTGGCG
CTGGCCGTGA CCGTGCCGAC GACAGCATGG CTGGTGGCAC GGTTCGGTTC CGGACGTGTC
TACATGGTGG CCCTGAGTCT GTTCGTGCTG GGGTCGGTGC TCTGCGGTCT GGCCTGGAAC
ATCGACGCGC TCATTGCCTT CCGGGTGGTG CAGGGGATCG GCGGTGGCCT GGTCAACCCG
GTCGCGATGA CGATTGTGCT ACGGGCCACG CCGCCGGAGC GGCGCGGGCG CGCCATGGGC
CTGTTGGGTC TGCCGGTGCT CGTCGGGCCG GTGATCGGGC CGACGCTGGG CGGCTGGCTG
GTCGACATCT CCTGGCGGTG GATCTTCCTG GTCAACCTGC CGCTGGGCCT GGCCGCGCTC
CTGCTCGCGA GCCGAGTCCT GCGCCCGGTC ACCGCGGCCG CGGGTGCCGT CCAGCGGGGC
GGCACGCTTG AGAGTGCTGA CGGGCGGCTC GACGTCCCAG GGTTGGCGCT TGTCGCGCCG
GGGCTGGCGC TGTTCGTCTA CGGGCTGGCG GAGAGCGGGC GGCGCGGGAC TGTGACCTCG
GCAGGTGTGC TCGTGCCGGC GCTGGCCGGG CTCGCGTTGG CGGTGGTGTT CGTGGTTCGG
GCCGCTCGGA TGCGCGCCCC ACTGGTCCAG GTTGCGCTGT TGCGGCTGCG GGCTGTCGCG
TCAGGGACGG CGACGCTGGC GCTGTTCGCG GCGGCCTACT TCGGTTCGAT GTTCGTCCTG
CCGCTTTACT GGCAGCTCGT GCGGGGGCTC AGCCCCGCGG AGACGGGGAT GCTGGCGATC
CCGCAGGCGC TCGCTACCGG GGCTTCGCTG CAGGTGGCGA GCCGGATGGT CGACCGGGTT
CCGCCTGCCC GCGTGGTGGG CTTCGGGATC GTGACGGCGT CCTGCGGGCT GATCACCGCG
ACGCTGTTGC TCGGCGTTGA CACCCCGTAC TGGCAGATGG TGGTGGCGAT GTCCGTCATG
GGGGTCGGCG CGGGCTCGAC GATCATGCCG ACGATCACGA CAGCGCTGCG GCATCTGAGT
GACCGGGACG CGCCGTCCGG CAGCACGCTG CTGACCATCA CCAACCAGGT GAGTGTCTCG
ATCGGAACCG CCCTGACCTC CGTCGTACTC GCGGCCGGCC TCACCACCCA GGGCGTGGCC
GGTGCGGCCG GTGGCGGCGG CGAGGGCGTG CTGCCGACCG TGGTGGACGG CCCGGCCGCC
GCCCGGCTTG CCGAGGCCTG CCAGGACACG CTGTTCGTGT CCGCCGCGCT GCTGGTCGCC
GCGCTCGTCG TGGCGCTGAC AGCGATCCCG GGCGGTCCGT TCAGTGCTTC TCGACGTCGC
CGGGTCCAGC CGCGTATCCG TGCTCCTCGA CGTCGCCGGG TTCGGCCTCG CGGGGAGGCG
CAGGATCAGT CGCCGGTTCG AGCAGCGCGG ACAGGCGATC TGACTCCGCC GCGGTGA
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| Protein sequence | MSSDLGSLAG PEEAGEPQEA GELRAEGERE GIRGEPGGRS VPSGSAGPPH TGLVFTVLVL
GGLLVVLDIT IINVAIRTLA ADLDASLPVI QWVSTGYTLA LAVTVPTTAW LVARFGSGRV
YMVALSLFVL GSVLCGLAWN IDALIAFRVV QGIGGGLVNP VAMTIVLRAT PPERRGRAMG
LLGLPVLVGP VIGPTLGGWL VDISWRWIFL VNLPLGLAAL LLASRVLRPV TAAAGAVQRG
GTLESADGRL DVPGLALVAP GLALFVYGLA ESGRRGTVTS AGVLVPALAG LALAVVFVVR
AARMRAPLVQ VALLRLRAVA SGTATLALFA AAYFGSMFVL PLYWQLVRGL SPAETGMLAI
PQALATGASL QVASRMVDRV PPARVVGFGI VTASCGLITA TLLLGVDTPY WQMVVAMSVM
GVGAGSTIMP TITTALRHLS DRDAPSGSTL LTITNQVSVS IGTALTSVVL AAGLTTQGVA
GAAGGGGEGV LPTVVDGPAA ARLAEACQDT LFVSAALLVA ALVVALTAIP GGPFSASRRR
RVQPRIRAPR RRRVRPRGEA QDQSPVRAAR TGDLTPPR
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