| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6405 |
|---|
| Symbol | |
|---|
| ID | 5674720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 7775928 |
|---|
| End bp | 7776323 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641245253 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001510648 |
|---|
| Protein GI | 158318140 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3801] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.235405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACCT GGGACGACGT GCGCCGGCTG GCGCTGGCGC TGCCCGAGAC GAACGAGAGC
CCCTCATACG GTTCGGCCTC GTGGCGGGTA CGGGACAAGG GCTTCGTGTG GGAGCGCCCC
CTGCGGAAAA CAGACCTCGC CGCGTTCGCG GCCCGCGGCG AGAAAGCGCC GGACGGCCCG
GTCCTGGGTG TGCGCGTCGC CGACGAAGGA GTCAAGAACG CGCTGATCGC CGACAGCCCG
ACGGTCTTCT TCACCGTCCC GCACTTCGAC GGCTACCCGG CGGTCCTGGT CCGTCTCGAC
CGGATCTCCG TCGAGGAGCT GGACGAGCTG GTCGTCGAGG CCTGGCTGCT GCGGGCCCCG
AAACGCGCCG CGAGGGCATA CCTGGATGCC CGGTGA
|
|---|
| Protein sequence | MATWDDVRRL ALALPETNES PSYGSASWRV RDKGFVWERP LRKTDLAAFA ARGEKAPDGP
VLGVRVADEG VKNALIADSP TVFFTVPHFD GYPAVLVRLD RISVEELDEL VVEAWLLRAP
KRAARAYLDA R
|
|---|
| |