Gene Franean1_6394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6394 
Symbol 
ID5674710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7761974 
End bp7762816 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content75% 
IMG OID641245243 
Productnitroreductase 
Protein accessionYP_001510638 
Protein GI158318130 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.130468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGCTG ACAGCTCCGA CGCGGCGCGG GAGCTGGCGG CGGTGCTCCC CGCGGACACG 
GTGGGCCTGC TGGAGGGCCT GACCACGACC CGGGCCATCC GCCGTTACAC CGACGAGCCG
GTGCCCCGCG AAGCGCTGCG CGCCATGCTC TTCGCGGCCA CCAGGGCACC CAGCGGCTCC
AACCGGCAGC CGTTCCGGTT CATCGTGCTG ACCGACGGCC CGAAGGCCGG GGCGGCGAAG
AAGCTGATCG GTGACGCCGC GCGGCGGACC TGGGGCGGCA AGCGCCAGGT GGACCGGTAC
GACAGCGGGA CGGGGACGGT CGCGGACTCG CCCAAGGCCC GGATGGCCGC GGCGATGCAG
CAGTTCGTCG ACGGGTTCGA GCGGGTGCCC GTGCTGATCC TGCCGTGCCT GGTGCGCTAC
CGGGACCCGA CTCCGTCCGA GGGGGCGTCG GTGTATCCGG CGTGCCAGAA CCTGCTGCTG
GCGGCCCGCG CGCTCGGCTA CGGCGGGGCG TTCACCGGCT GGAACTTCGC CGTCGACGCG
CAACTGCGCG AGCTGCTCGG CGTGCCCGAG GGCACGTTCG TTGCCGGCAC CATCACTCTG
GGCCGGCCGG CGGGCCGGCA CGGCCCGGTG CGCCGCCGCC CGATGGCCGA GCTTGTGTTC
GAGGAGGAAT GGGGAGCGCC GGCGGACTGG GCGCTCGACC CACCCGGCAC CGCGTTCACC
TCCGCCGGCC CGCCCCGGCC CCCGGCCGTA GCGGGCAACG GCACTGCGGG CGGGAGCACT
GCGGGCGGCG GCATCACCGG CGGCATCACC GGCGGCAACG ACGAGGAAAG GCCCCGGTCA
TGA
 
Protein sequence
MCADSSDAAR ELAAVLPADT VGLLEGLTTT RAIRRYTDEP VPREALRAML FAATRAPSGS 
NRQPFRFIVL TDGPKAGAAK KLIGDAARRT WGGKRQVDRY DSGTGTVADS PKARMAAAMQ
QFVDGFERVP VLILPCLVRY RDPTPSEGAS VYPACQNLLL AARALGYGGA FTGWNFAVDA
QLRELLGVPE GTFVAGTITL GRPAGRHGPV RRRPMAELVF EEEWGAPADW ALDPPGTAFT
SAGPPRPPAV AGNGTAGGST AGGGITGGIT GGNDEERPRS