Gene Franean1_6379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6379 
Symbol 
ID5674695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7741057 
End bp7742208 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content68% 
IMG OID641245228 
Productzeta toxin family protein 
Protein accessionYP_001510623 
Protein GI158318115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC CGAACCCGTA CTACCTTCCC GAAGAGCGTG CCCGGGAGAT CTTCACCAAC 
GAGATTGTCA GGGAGAAGTT CGCGGGTGTG GTCTCCCACC GCGACGACGG GCGACGACCG
GTCGCGGTGA TCGTCATGGG CCAGCCTGGC GCCGGGAAGA CCCGAATCGC CGACGCCGTC
AAGCAACAGC TCGACGAACG GGGCGGGGCC GCCCACGTCG TGGGCGACTT CTACAAGCCC
TACCACCCCG ACTACGACGA GCTGGTCATC ACCGACCCGG AGCGCGCCTC ACCGCTGACC
TCCCCGGACG CCCGCCGGTG GATCGACATG GCCACCGAGT ACGTGATCGA CCAGCGTGCG
GACGTACTGC TGGAAAGCGC CGGTCGCGAC CGGGCCGACT TCGCCGACAT CGCCGAACGC
CTCCACAACA ACGGCTACCG GGTGGAGGCG GCCGTGGTGG CCGTCGATGA GGCGCACAGC
AGGCTCGGTA TCGTCGACCG CTACCACGAA CAGGTTGCGG ACACCGGATA CGGCCGGCTC
ACCGCGCGGG AAACCCACGA CCTCTCCTAT GCCGGCGTGC TGGATTCGGC CGACTTCATC
GACCGATCAG ACGCGGTCGA CGCGGTCGCC GTGGTCCGCC GCAACAACGA GATCCTGTAC
GCCAACGAAC GCGATGCCAG CGGCGGGTGG CAGCAGGCGC CCGCCACCCG GGAGGCGATT
GAGGCCGAGC GCGGCCGTAG CTGGAGCCCC GAGGAGACCG AACAGTTCGC TAACAAGATC
GACAATCTGG CGAATGCGAT GGGCCCCCAG TGGCACACCG AGTTCGACGA CATCACTGAC
CGGGCGCGGG CACGGGCCGA TCCGGCGGTG GCCCTGCCCA AGCGGAGTCC CACCGTCGAA
ACGAGCACCA AAGCCGGCTC CCGTAGTCCG ATCCCTGCCT CTGGTACGGA CACCGCCGCG
ACTCCCGATG CCGCCTCCCC CGCAGACCCC CAGATCACAC CGGCGGCGCC CTCACATACC
ACCCAGTCCC CGGCACAAGC GTCGTTCTCT GGGTCTGTCA AGCCATCCCC GCCTCGCAGG
GGCAGTGGCC CACCACCTGG AACCCCGCCA CCCGGTCCGC AGATCGGCCA GGGACCTGCC
AAAGGCCGAT AG
 
Protein sequence
MTQPNPYYLP EERAREIFTN EIVREKFAGV VSHRDDGRRP VAVIVMGQPG AGKTRIADAV 
KQQLDERGGA AHVVGDFYKP YHPDYDELVI TDPERASPLT SPDARRWIDM ATEYVIDQRA
DVLLESAGRD RADFADIAER LHNNGYRVEA AVVAVDEAHS RLGIVDRYHE QVADTGYGRL
TARETHDLSY AGVLDSADFI DRSDAVDAVA VVRRNNEILY ANERDASGGW QQAPATREAI
EAERGRSWSP EETEQFANKI DNLANAMGPQ WHTEFDDITD RARARADPAV ALPKRSPTVE
TSTKAGSRSP IPASGTDTAA TPDAASPADP QITPAAPSHT TQSPAQASFS GSVKPSPPRR
GSGPPPGTPP PGPQIGQGPA KGR