Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6363 |
Symbol | |
ID | 5674679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7724606 |
End bp | 7725283 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641245212 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001510607 |
Protein GI | 158318099 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATCG TGCACGGACA GGACGGTGCG GCACCCGTGA CGCGCCGGCC GTCAGCGGCC GGCACCGGCG GCGGCGCACC TACACCTGCC CGCACGCCGG CTGCGGCCCG GCAGCCGCTT TCGCGGCGAG AGGTCGTCGA GCTGCACGGC CATCTGGTCG CCGGGAATCC CACCGCGCTC GCCGTCGTCC ACGAGAGGTA CGCCCGCTAC CTGCTTGCCG TCGCCACGCG GGTGACCGGT GACGCCGACG CGGCCCGGGA CGTCCTCCAG GAGGTGCTGG TCGCGTTCTG GCAGCATCCG CTCCGGTTCG ACCCGGACCG CGGGGAGCTG CGCACCTGGC TCGCGGTACT CGCCCATCGG CGCGCCGTCG ACTGGGTCCG CCGGGAGATC GCCCGGCGCC CTACCGACCT GGTCGCGCGG GCCCTCGCCG AGCAGTCGGA CGGCCCGGCG GCCGACCGCG ACTTCCTCGC GCGGGAGGAC GCCGACGCCG TGCGGGCCGC CGTCGCCGCG TTACCCGTGA AGCTGCGCGA GGTGGTGGAG TTGGCGTACT ACAGGGAGTT GACCTACCGT GAGGTGGCCA TTCGGCTCGC CATCCCGGAG GGGACGGCAA AGTCGCGCAT GCGAGCGGCC CTGTCAGCCC TCGCGCTGGC CCTCACCCGC CTGGGAGCCG CCCCGTGA
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Protein sequence | MPIVHGQDGA APVTRRPSAA GTGGGAPTPA RTPAAARQPL SRREVVELHG HLVAGNPTAL AVVHERYARY LLAVATRVTG DADAARDVLQ EVLVAFWQHP LRFDPDRGEL RTWLAVLAHR RAVDWVRREI ARRPTDLVAR ALAEQSDGPA ADRDFLARED ADAVRAAVAA LPVKLREVVE LAYYRELTYR EVAIRLAIPE GTAKSRMRAA LSALALALTR LGAAP
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