Gene Franean1_6348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6348 
Symbol 
ID5674664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7707736 
End bp7708227 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID641245198 
Productcupin 2 domain-containing protein 
Protein accessionYP_001510593 
Protein GI158318085 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACG ATCGCTTCAT CATGCTCGAC AAGGCGGAGG TCCGCCCGGG TCGCTTCCCC 
CTGCCGCCCG CCTTCGCGGT CAAGGTGAGG ACGGAGGACA CCGAGGGACG CTTCTCCCTG
CTGGAGGTGT CGGTGGGGGT CGACATCCCT CGGCACGTCC ATCTCCGGGC GGACGAGTGC
ATCTACGTGC TGGACGGCAT GTTGGGCATC GACTTCGACG ACCGGACCTA CACGGCGACG
GCGGGCATGT TCACGCTGCT CCCCCAGGGC GTTCCCCACG CGCTCCGCCG CGTCTCGACG
CCGCCTCCTC GGGTACTGCA GATCTCCTCG CCCGGCGGGT GGGAGCGGTA CCTCGAGGAC
CTGTTCGAGG CCGGGCCGAC GGTCCTCACG GACGGAGCAC TCGATCCGGT GAAGATCAAC
CCGATCGCCG CCAGGTACGA CATCCGCTAC GAGGAGCGGC CCTGGTGCGT CACCCCTGGA
ACGGACGGGT AG
 
Protein sequence
MPDDRFIMLD KAEVRPGRFP LPPAFAVKVR TEDTEGRFSL LEVSVGVDIP RHVHLRADEC 
IYVLDGMLGI DFDDRTYTAT AGMFTLLPQG VPHALRRVST PPPRVLQISS PGGWERYLED
LFEAGPTVLT DGALDPVKIN PIAARYDIRY EERPWCVTPG TDG