Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6334 |
Symbol | |
ID | 5674652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7693220 |
End bp | 7694497 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641245186 |
Product | transposase IS4 family protein |
Protein accession | YP_001510581 |
Protein GI | 158318073 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGCGT GGCCTCGGTG CCGCTGGGTG GTTTGGTCAC GGTTCGTGGC TTCGATGGTG ACCCCGGACC AGGTGTCGGT CGGGGTGCTG GTGACGGCGG TGCCGCGTGA CGCGGTCGAC GAGGCCGTCG CGGCCTGTGG GGTGGGTGCG CGGCGGGCGG GCGGGAAGCT CCCACCGCAT GTGACGGCGT ACCTGACGTT GGCGATGTCC CTGTTTCCGG ACGACGACTA CGCCGAGGTC GCCCAGAAGG TGACCGGGTC GCTGGACCGG TTCGGCTGCT GGGACGCGGC GTGGGCGCCG CCGAGCGCGA GCGGGATCAC CCAGGCGCGT AAGCGGCTGG GCCGGATGGT GATGGCCGAG GTGTTCGAGC GGGTCGCGGG CCAGGTCGCG ACACTGTCGA CGCGTGGCGC GTGGCTGCGG GGCCGGTTGT TGCTCGCGAT CGACGGGTTT GACGTCGACG TGCCCGACAC CGAGGAGAAC GCGGCCGAGT TCGGCTACGC CGGCACCGGG GAGAAGCGGT CGGCGTTCCC GAAGATCCGG GTCGTCGCGT TGGCGGAGTG CGGGACGCAC GCGTTCCGGG CCGCCGAGGT CGGTGGCTGG GCGGCTGGGG AGAGGACGCT GGCCCGCGGG CTGCTGATGC GGCTGAACCG CGACGAGGTG CTGACCGCCG ACCGTGGGTT CTACTCGTTC GACAACTGGG CGCTGGCCGC GGGCACCGGC GCCGACCTGA TCTGGCGGGC CCCGACCGGG CTGAACCTGC CGGTCGTGCG GGTCCTGTCC GATGGCACGT TCCTCACCGT CCTGATCAAC CCGGAGATCA CGGGAGGTCG GCGCCGCGAG CGGCTGCTCG CCGCCGCGAA GGCCGGCGAC GAGCTTGATC CGGACGAGGC GCACCTGGCC CGGGTCGTCG AGTACGACAT CCCCGACCGG GCCGGTAACG GTACCGGCGA ACTGGTCGTC GTGCTGACCA CGATCCTCGA CCCGCGTCAG GCCCGTGCCG ACGAGGTCGC CGCCGGATAC AACGAGCGCT GGGAGGAGGA AACCGCGAAC GACCAGCTCA AGACCCATCT ACGCGGCCCC GGGAGAGTCC TGCGCTCCCG GCTGCCGGAC CTGGCGGTCC AGGAGATGTG GGCCTGGCTG ATCGTCCAGT ACGCGCTCAC CGCCCTGATC GCCGGCGCCG CGGAGGCCGC CGAGATCGAC CCCGACCGGG TCGGTTTCGC CCGGACACTG CGCCTGGTCC GCCGTTCCGC CACCGGAACG GCGGACATTT CCCCCTGA
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Protein sequence | MAAWPRCRWV VWSRFVASMV TPDQVSVGVL VTAVPRDAVD EAVAACGVGA RRAGGKLPPH VTAYLTLAMS LFPDDDYAEV AQKVTGSLDR FGCWDAAWAP PSASGITQAR KRLGRMVMAE VFERVAGQVA TLSTRGAWLR GRLLLAIDGF DVDVPDTEEN AAEFGYAGTG EKRSAFPKIR VVALAECGTH AFRAAEVGGW AAGERTLARG LLMRLNRDEV LTADRGFYSF DNWALAAGTG ADLIWRAPTG LNLPVVRVLS DGTFLTVLIN PEITGGRRRE RLLAAAKAGD ELDPDEAHLA RVVEYDIPDR AGNGTGELVV VLTTILDPRQ ARADEVAAGY NERWEEETAN DQLKTHLRGP GRVLRSRLPD LAVQEMWAWL IVQYALTALI AGAAEAAEID PDRVGFARTL RLVRRSATGT ADISP
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