Gene Franean1_6327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6327 
Symbol 
ID5674646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7684621 
End bp7685643 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content71% 
IMG OID641245180 
Productaldo/keto reductase 
Protein accessionYP_001510575 
Protein GI158318067 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.563142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCC GACGTGGGGT GGGGCGGTCG GGGCTGCGGT TCAGCTCGCT GAGCCTCGGC 
GGTATGACCT TCGGCAGCAA CGAGGCGTTC GGCGCCATCG GGTCGGATCC GACCGAGGCG
GCCCGCGTCG TCGCGCTCGC TCTGGACGCT GGCATCGACA CGTTCGACAC CGCCAACGTC
TACGGCGAGA GCGAGCAGCT GCTCGGACGG CTGCTCCGGC GGCGGCGTGA CGATGTCGTG
ATCTGCACGA AGGCGCGGTT CCCGACCTCC GGACACGTCG GTGACGGACT GCCGCCCTCG
AGCAGCTACG GCCTGTCGCG CGCGGCGGTC GTCCGGTCCG TCGAGGCGTC GCTGCGGCGC
CTCGACACCG ATCGCATCGA CGTCCTCTGG CTGCACATGC AGGACAGGTC CGTCCCAATC
GAGGAGACTC TGTCCGCCAC CGACCTGCTG GTCCGCCAGG GCAAGGTGCG TTATCTCGGG
TTGTCGAACT TCATGGCGTA CCGGGTGGCC GAGGCTGTCC TCACCGCGCG GGCGCGGGCA
CTGGAACCAC CGGTGGCCCT GCAGGTGCCC TGGTCGGCGG TGAGCCGGGA CGTCGAGCGG
GAGCTCGTCC CGGCGGCCCG TCACCTCGGG CTCGGGGTGG CCGTCTACAG CCCGCTGGCC
CGCGGTTTCC TCAGCGGCAA GTACGACCGA GGCGCAGAGC CGGTGGTGGG CAGCCGGCTG
GGGGAGTGGC GCGACGAGTT CGCCCGCTAC GACTCCGACC GCAACTGGGC CGTCCTGGCC
GCGCTGCGGG AGACAGCGCG CGCGCATCAG GTGCCGGTGA GCGCGGTCTC CCTCGCCTGG
CTGCTGGCCC GGCGTCCGGT GGTCAGCGTC GTGATCGGGG CACGCACCGA GGAGCAGCTA
CGGGAGAACC TGATGGCGGC GGACGTGCGG CTCACCGCCG AGGAGATCGC GCGACTGGAC
AAGGTGTCGG AACCTGACTG GGGCTATCCG GAGTCCTTCA TCGCGCGCTT CGAGCCGTGG
TGA
 
Protein sequence
MISRRGVGRS GLRFSSLSLG GMTFGSNEAF GAIGSDPTEA ARVVALALDA GIDTFDTANV 
YGESEQLLGR LLRRRRDDVV ICTKARFPTS GHVGDGLPPS SSYGLSRAAV VRSVEASLRR
LDTDRIDVLW LHMQDRSVPI EETLSATDLL VRQGKVRYLG LSNFMAYRVA EAVLTARARA
LEPPVALQVP WSAVSRDVER ELVPAARHLG LGVAVYSPLA RGFLSGKYDR GAEPVVGSRL
GEWRDEFARY DSDRNWAVLA ALRETARAHQ VPVSAVSLAW LLARRPVVSV VIGARTEEQL
RENLMAADVR LTAEEIARLD KVSEPDWGYP ESFIARFEPW