Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6323 |
Symbol | |
ID | 5674642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7680083 |
End bp | 7680802 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641245176 |
Product | phytanoyl-CoA dioxygenase |
Protein accession | YP_001510571 |
Protein GI | 158318063 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTTC TTCGTGGACT ACTCTCCCCG TCCGAGGTCG AGAACTGTTC CATCGAGATC GACCAGATGA CCGCCAGCTG GGAGGAGATT CCGAACGTTC GCGTGATAGG GAAGCGGAAT CCTCGGGTCC CCTCGTATGA CCTCGAGGAC CTGCCGGACC CGGACGGCAG GACGGTGGTG CGCAAGGTGA CGGGATTCAC GCAGCTCTCC GCCGTCCTAC GCCGCTGCCT GGTCGAGCAT CCGGAGCTGA TCGACACCCT TCACCTGATT CTCGGTGACC GTGTCGAACT GTATCGCGAC GCGATCATGT TCAAGGCGGC TGAGGTGGGC CAGGAGAAAC CCTGGCACCA GGATGCCGTG TACTGGCCGT TTCGTCCGAT GAGTCTGGTG AGCGCGATGA TCGCCATCGA CCGCTCGACT CCGGAGAACG GCTGCCTCCA GGCGGTTCCG GGCTCCCACC GGCAAGTGGT CGAGCATCAG AAGGTGAACT GGGAACTGCA GGTGGACCCG GCCAGCTGCG AGCAGGGTTC TGTCTATGTT CCGCTGGAGC CGGGTGACTG CCTGATCTTT CACAGTCTGA TCCTGCACGC CTCCGCGCAC AACACCTCAC GACACCGGCG ACGAGTCTCC ATCACCAGTT ACAGTCCGGG CGGGCTGGAG ATCCTGGATC CGGATCTGGA CCCTCCCGTG TTGATCAGTG ACCTTTCGGA TCGGTCATGA
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Protein sequence | MTVLRGLLSP SEVENCSIEI DQMTASWEEI PNVRVIGKRN PRVPSYDLED LPDPDGRTVV RKVTGFTQLS AVLRRCLVEH PELIDTLHLI LGDRVELYRD AIMFKAAEVG QEKPWHQDAV YWPFRPMSLV SAMIAIDRST PENGCLQAVP GSHRQVVEHQ KVNWELQVDP ASCEQGSVYV PLEPGDCLIF HSLILHASAH NTSRHRRRVS ITSYSPGGLE ILDPDLDPPV LISDLSDRS
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