Gene Franean1_6317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6317 
Symbol 
ID5674636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7670206 
End bp7671864 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content53% 
IMG OID641245170 
Producthypothetical protein 
Protein accessionYP_001510565 
Protein GI158318057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA CGTTGACGCG CGACGTCGTT CGCCTATTTG AGCTTCAAAA TGTCACTCTC 
CGCGAAGTTC GGATCAAGAA TTATCCGGAC GAGCGAAACA TCCTGGTTTA CGTCGAAGAC
GGCCAGTATT CCAAGGCGCT GGAAATAGCT GAATCGATTG AACGGCAGCT GTCAAACAAT
ACGTCGACAC TGATAGTGGT GCGTCGTGCT CAGCAGGCAG AACGACCATC TACAGTTACC
GTCGATGTTC GCGACTCGGC GGCCCTCGAT TTTCAGAGAA TTGTAGCAGC TCGAAATCGT
GTGTCCGAGG TGCAACCGAG CCTCAGCTAC GTGAAAGACT ATGCGGAGAA CCTTGCTACT
ATAGCCGCGC AGCGGCACCA TCTCGTATTT GGGCGTCGAG GTGTCGGCAA GAGCACACTG
CTGGTCGAAG CCAAAAGAGT AGTCGAGAAC GAGGGTTCCC TAACAACCTG GATAAATCTC
CAGACTCTTC GACGCGAGAC ACCAATTCGG ATATTTCTCC GAATTGCGCG CGAGATCGTC
GGAAATCTCC TGGCGGAACT TTCTAATGTG CGAGCCGACT CCGCGGTGAC AGCCGAGGCC
TCACGACTTT ATGACACTCT CGCCACGCTC ATATCCAACG ACGCGACAGA AGAAAATAGC
GGGACGCGGG TAATTCCAGA GATTCAGCGG GTTCTTCGGC GTGGCCTCGC CCTAATCGAC
AAAGACATGT ATGTTTTTGT CGATGATTTT TATTACGTTT CCCGCGACGA GCAGCCTGAG
ATGCTCGATA TTCTTCACGG GTGCGTTCGG GATTGTCGAG CCTGGCTGAA GATAGCATCG
ATTAAGAATC TGACAAAATG GTGGACACCC TCCCCTCCTA GAGGTCTTCA AACTGGCCAG
GATGCAGACC TAATCAGCCT AGATATAACT CTTCAGGATC CAGGGAGATT GCGCAAGCAT
CTCACGACGA TACTTGAACA GTATTGCCTG GAAGTCGGTA TATCGAGGCC CACCCGCCTG
TTTAGGCCAG ACTCCCTCGA CAGGCTACTA TTCGCATCAG GCGGAGTGCC CAGAGATTTT
CTAGTTCTTG CCTCCGCGGC AGTTGGAAAG GCGCGCGAGA GGGAGAGCGC GAAGGTCGTC
GGCGTCCAAG ATGTCAATCG GGCTGCAGGG GACGCCGCCG ACGCAAAGAT CCAGGAACTA
GAAGAGGACT TGGCGTCCAA TATCGGACTT TCTGGGCGCA CACTAGAGGC TCTAGGAATT
ATTCGTCGAT TCTGCCTAGA CGAAGTTGCG TCCACTTTTT ACGGGGTCGA CTTCTTCGAT
AAAGAAACGA ATGCCAGGGA GTATCAAGTC TTCAGCGATC TCCTTGATCT GAGGCTCCTT
CATGTCATTC ATGAAAGTGT TTCTGACGCC CACGAGGCGG GCAGAAAGCA TGAGGTTTTC
ATGTTGGACC TAAGTCAGTA CACCGGGTCG CGCCTCAAAC AGGGCTTGCG TGTTTTGGAT
CTACAAGGAG ACTCCCTTCT CGTGAAAAGG ACGCGGGTAA AGGATAGTGC GAGGAATGTG
TCCGACTCCA AAAGCCTAAT CTCGGTGCTT CGGACTTCTC CGGGCTTTCC GCTCTCTCGT
TTCAGTCAAT TGGTATCGCG CGACGGAACG GCCACCTAG
 
Protein sequence
MSDTLTRDVV RLFELQNVTL REVRIKNYPD ERNILVYVED GQYSKALEIA ESIERQLSNN 
TSTLIVVRRA QQAERPSTVT VDVRDSAALD FQRIVAARNR VSEVQPSLSY VKDYAENLAT
IAAQRHHLVF GRRGVGKSTL LVEAKRVVEN EGSLTTWINL QTLRRETPIR IFLRIAREIV
GNLLAELSNV RADSAVTAEA SRLYDTLATL ISNDATEENS GTRVIPEIQR VLRRGLALID
KDMYVFVDDF YYVSRDEQPE MLDILHGCVR DCRAWLKIAS IKNLTKWWTP SPPRGLQTGQ
DADLISLDIT LQDPGRLRKH LTTILEQYCL EVGISRPTRL FRPDSLDRLL FASGGVPRDF
LVLASAAVGK ARERESAKVV GVQDVNRAAG DAADAKIQEL EEDLASNIGL SGRTLEALGI
IRRFCLDEVA STFYGVDFFD KETNAREYQV FSDLLDLRLL HVIHESVSDA HEAGRKHEVF
MLDLSQYTGS RLKQGLRVLD LQGDSLLVKR TRVKDSARNV SDSKSLISVL RTSPGFPLSR
FSQLVSRDGT AT