| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6303 |
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| Symbol | |
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| ID | 5675784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7659082 |
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| End bp | 7660332 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641245156 |
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| Product | integrase family protein |
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| Protein accession | YP_001510551 |
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| Protein GI | 158318043 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.66477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGC AGGACCCTCG CGGTGACGAG GACACCCCGG ACGAGTCGAC CGGCAGGAAG
AAGAAGCAGA ACCGCCGGGC GCAGGGCGAG GGCTCGGTGT ACTGGCGTGA GGACCGTCAG
CGTTGGGTCA TCGAGATCGA CTACGGAGTG GTGAACGGCC GGCGCAAGCG CGTGCCGCGC
TACTTCCGGA CGCAGGAAGA GGCGATCGAG GAGCAGCGGA AGGCGCGGCA GAGCAAGGCG
GACGGGCTGA CCACCCTCGA CCGGCGGTCG CGGTTCGCGG ACTTCCTGAC GTACTGGCTG
GACGAGATCG TCGACCCGTC TGAACGGGCG GAGTCCACGA AGTCGAACTA CCGCGTCATG
GTGAACAACC ACATCCGCCC GGCGCTCGGC TCGCGCCGGC TCGTCGAACT GAAGCACGAG
GATCTTCAGC GGTTCCTGAA CCGCAAGGCG GCGGATGGGT ACAGCACGTC GACCATGCGC
ACGCTGCGTT CCGTCCTGCG CCAAGCGCTC AACGAAGCGG TCATCACCGA GAAGATCAGT
CGCAATGTCG CCGAGACGCT GCGGGTCCCG AAAGCGCGGA AACCGAAGCG GAATGTGGCC
GCGCTGAGCA GGGACGACGG GCTGCGGCTG CTCGCCGAAG CGAAGTCCAC CCGGCATTAC
GCGCTGTATG TGCTGCTGGC GATGGTCGGT CTACGCCGTG GGGAAGCGCT CGCGTTGCGC
TGGTCCGACT TCGACGAATC GGCAGGCACG CTGCGGGTGG TACGCCAGGT GACCCGGGTG
AGCGGCGTGA AGGGGCTGGT CGTCGGCCCG ACGAAGAGTC AGGCCGGAAC ACGCACGCTC
ACGCTGCCGA CCCGATGCGT CCGGGTGCTC CAGGCACACC GCACCGCCCA GCACGCCCAC
CGGCAGGCCG CGGGGAAGCG GTGGAAGGAG AACGGGCTGA TCTTCCCGAG TACCGTCGGC
ACGCACATGG AGCCGCGCGG GCTGAACACC CACCTGTCCA AGCTGTGCCA GCGTGCCGGG
CTGCCGCACC TCGGCCCGCA CGCGCTGCGG CACACCGCGG CCACGATGGC CTACGCGCTC
GGTGTCGACT GGAAGCAGAT ACAGCAGATG CTCGGCCACA CGATGCTGTC GACCACGATG
GACATCTACG TGGACCTGGT CGACAGCGTC CACCGCGACG CGGCGTCCAA ACTCGACGCG
TGGTTCGACG AACCTGATGA AGACGGTGGG CTCAGCCCAG CACAGCGGTA G
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| Protein sequence | MTGQDPRGDE DTPDESTGRK KKQNRRAQGE GSVYWREDRQ RWVIEIDYGV VNGRRKRVPR
YFRTQEEAIE EQRKARQSKA DGLTTLDRRS RFADFLTYWL DEIVDPSERA ESTKSNYRVM
VNNHIRPALG SRRLVELKHE DLQRFLNRKA ADGYSTSTMR TLRSVLRQAL NEAVITEKIS
RNVAETLRVP KARKPKRNVA ALSRDDGLRL LAEAKSTRHY ALYVLLAMVG LRRGEALALR
WSDFDESAGT LRVVRQVTRV SGVKGLVVGP TKSQAGTRTL TLPTRCVRVL QAHRTAQHAH
RQAAGKRWKE NGLIFPSTVG THMEPRGLNT HLSKLCQRAG LPHLGPHALR HTAATMAYAL
GVDWKQIQQM LGHTMLSTTM DIYVDLVDSV HRDAASKLDA WFDEPDEDGG LSPAQR
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