Gene Franean1_6285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6285 
Symbol 
ID5674604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7633748 
End bp7634326 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content70% 
IMG OID641245137 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001510533 
Protein GI158318025 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCG CCGATCCGAC GGTCATCGAG ATCCCCACCG TCCTGACCTC GCGGCTGGTC 
CTGCGGGGCT GGCGGGCCGC GGACGTCGAT CCCTACACGG CGATGAACAG CGACCCCGAG
ACGATGCGCT ACCTGGACGG GACGTTCGGC CGGGACGCCT CCGAACGACT CGTCACCCAC
CTGATCGGTA TGTGGGTGCT GCTCGGCCAC GGAATGTGGG CCGTCGAAGA CCGGCGGACT
GGGGAGTTCC TCGGCCGGGC CGGTTTGTAC TTCGGCCCCG GCTGGCCCGG CATCGAGGTG
GCGGTGTCCA TCTGCCGAGA CCGGTGGGGC CAGGGCCTCG GCACCGAAGC GTGCCAGGCC
GCTCTCGACT GGGGGTTCGG CGCGCTCGCC GTCGACCAGA TCGTGACCTT CACCAACAGG
GGCAACGCCG GCATGAACGC GATCGCGCGC AAGCTCGACA TGGCGTTCCA GGGCGAGGCC
GACAAGATCG GCCCCTGGGC GGACAACAAC GTCTACGCGA TCACCCGCGA GGACTGGGCC
GCCCGCCGGC AGGCCAGCAA CCCCGCCGGC AGAGGCTGA
 
Protein sequence
MQLADPTVIE IPTVLTSRLV LRGWRAADVD PYTAMNSDPE TMRYLDGTFG RDASERLVTH 
LIGMWVLLGH GMWAVEDRRT GEFLGRAGLY FGPGWPGIEV AVSICRDRWG QGLGTEACQA
ALDWGFGALA VDQIVTFTNR GNAGMNAIAR KLDMAFQGEA DKIGPWADNN VYAITREDWA
ARRQASNPAG RG