| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6264 |
|---|
| Symbol | |
|---|
| ID | 5674583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7610583 |
|---|
| End bp | 7610942 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641245116 |
|---|
| Product | phage transcriptional regulator, AlpA |
|---|
| Protein accession | YP_001510512 |
|---|
| Protein GI | 158318004 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.174977 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGGCAG GTGTGGTCCG TAGGCCTCGG CTCGGAGCTC CTACCTCCTG GCCGGGGCCG
TCTTGCATTA GCGACGCTAC TAGAGAAGTC GTCTACTATG CAAGTTACAT GCTGGCGACT
CATCTACTAG GCTGGCAACC CATGACGAGA GATCTGCGGC TCATGGCCGC CGCGGAGATC
GCGCAAGCCC TCGGCCTGGG CTCCGCGCGG ATCTACCAGA TCATGAAGGC CGATCCGACC
TTCCCTGAAC CGATCGCAAC CCTGCGCGTA GGCAAGATCT GGCTCGCCAC CGACATCGAG
GAGTGGATGC GCCGTACTGG CCGCGCACCC GCCAGCACCA TCTCGCCTTC CGCGGGCTGA
|
|---|
| Protein sequence | MLAGVVRRPR LGAPTSWPGP SCISDATREV VYYASYMLAT HLLGWQPMTR DLRLMAAAEI
AQALGLGSAR IYQIMKADPT FPEPIATLRV GKIWLATDIE EWMRRTGRAP ASTISPSAG
|
|---|
| |