| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6254 |
|---|
| Symbol | |
|---|
| ID | 5674573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7593677 |
|---|
| End bp | 7594969 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641245106 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001510502 |
|---|
| Protein GI | 158317994 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCCGC GTCCACGTAG CCCTGAGCTC TTCCCGCGGC GCGCCGCCGC ACTCGTGTCC
GCCGCGCTCG CGGACACCCG GGTAGTCGTC GTCAACGGTG CCCGGCAGGT CGGCAAGAGC
ACCCTCGCCC AGCTCACGGC GGGCCAGCAT GGCAACGCAC AGGCCTACTA CCTGGACGAG
GAGTCGACCC GAGCCGCCGC GACGGCGGAT CCGATCGGGT TCCTCAACCA CCACGGCCTG
TTGATGATCG ACGAGATCCA GCGTGTGCCG GAGCTGCTCC TCGCGATCAA GCGGGAGGTC
GACCGGGATC AGAGCCCGGG TCGGTTCCTT CTCACGGGCT CCGCCCGGCT GTGGGGGCTG
CGCGGGATCC CCGACACCCT CCCCGGCCGG TCGGAGACCG TCGAGCTGTG GCCGCTCGCC
CAGGGCGAGA TCGACGGAGG ACCGGACGGC TTCGTCGACG CCGTGTTCGC CGACGACGAC
CTCGGCGCTG ACCCAAGCGT TGACCTTGAC CTCGCCTCCG GCGCGCTGCG GCGCGACGAC
TACGTCGGAC GGGCGCTGCG GGGCGGCTTC CCCGAGGCCG TCCGCCGTGC CGATCCCCGA
CGCCGGGCGC GGTTCTTCGA GTCCTACATC TCGGACCTGA TCGCGCGGGA CATCCGCCAG
ATAGCCGAGA TCGAGCGGAC GTCCGAGCTG CGCAGACTCG TCCAGGCGCT GGCCGCGAAC
ACGAGCGGCC TCGTCGTCCC ACGCCGGCTC AGCAATGACC TGGACGTCTC CGCGTCCACG
GTGGCCCGGC ACATCGAGGC ACTCGAGCTG GTCTACCTCG TGCAGCGGAT CCCGGCCTGG
TCCAGCAACC TCACCACCCG CGCGGTCGCG ACCCCGAAGC TCATCCTCGT CGACTCCGGG
CTCGCCGGGC ACCTGACCGG CATGACATCG CGGCGCGCAT CGCATCCGAC GGCCCCCGTG
GGCCCGCTTC TCGAGAACTT CGTGCTCGGA GAACTGGCCC GCCAGCTCAC CTGGGCCGAC
GAGCCGGTCG CCCTTTTCCA CTATCGCGAC CGCGACCGTA ACGAGGTCGA CGCCGTCCTC
GAACGGGCAT CCGGCGAGGT CGTCGGGATC GAGGTGAAGG CCGCCGAGAC CGTGCGTGCC
GAGGACTTCC GCGGGCTGCG CCGGCTCGCG GATCAGATCG GCGATCGTTT CCGTGCCGGC
TATGTTCTCT ACGCCGGAGC CGAGGTCCTT CCCTTCGGCC CACGCATGCG GGCCGCCCCG
ATCTCAACTC TGTGGACGAC AGGATCAGGG TAG
|
|---|
| Protein sequence | MEPRPRSPEL FPRRAAALVS AALADTRVVV VNGARQVGKS TLAQLTAGQH GNAQAYYLDE
ESTRAAATAD PIGFLNHHGL LMIDEIQRVP ELLLAIKREV DRDQSPGRFL LTGSARLWGL
RGIPDTLPGR SETVELWPLA QGEIDGGPDG FVDAVFADDD LGADPSVDLD LASGALRRDD
YVGRALRGGF PEAVRRADPR RRARFFESYI SDLIARDIRQ IAEIERTSEL RRLVQALAAN
TSGLVVPRRL SNDLDVSAST VARHIEALEL VYLVQRIPAW SSNLTTRAVA TPKLILVDSG
LAGHLTGMTS RRASHPTAPV GPLLENFVLG ELARQLTWAD EPVALFHYRD RDRNEVDAVL
ERASGEVVGI EVKAAETVRA EDFRGLRRLA DQIGDRFRAG YVLYAGAEVL PFGPRMRAAP
ISTLWTTGSG
|
|---|
| |