Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6227 |
Symbol | |
ID | 5674546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7564121 |
End bp | 7565518 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641245079 |
Product | hypothetical protein |
Protein accession | YP_001510475 |
Protein GI | 158317967 |
COG category | [S] Function unknown |
COG ID | [COG1511] Predicted membrane protein |
TIGRFAM ID | [TIGR03061] YhgE/Pip N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACGAG ACAGTCTGTT GGGTCCGGGG AACGGGACAC CGCGGGATGA CTTTCCGGTT CGCGTGCGCG ACCTGCTGCG CCAACGCGCG GTGTGGGTGC TGCCGCTGGT CCTGGCCTCG GTCGTCGTCG CGTCGATGAC CGCGCTGTAC CTCGCGTCGG CGGTGAACCC GCTGGCTCAT GTGCGCGGCC TGCCGGTCGA GGTGGTGAAC AGCGACCGCG GGGCCACGCT GGGAACAGAA CACCTCGACA TCGGCAGGCG GATCGAGACC GGCCTGCGGG CGAGCCCCGC GGTGTCCGGC CGGCTGCGGC TGGAGCCGGT GACCCGGTCC GAGGCCGAAC GAGCCATGAA CCGCGGGCGC GCGTACGCGA CCGTCGTGAT CCCGCCCGAC TTCACCGCCT CGCTCCTGAC ACAGGCCGGT CTGCCGCCAG CCGGCTCGTC GGCAGCCGGT CCGCCGTCGG CCGGGACAGC GGGTGCCGGG GCGATCCAGC TGCTGACCAA CCCGCGGGCC GGCACGCTGG GGGTGAGCCT GGCCACCGGC ATCCTGCAGC CCGCTGTCGC CACCGCCTCG CGGACGATCA GCGGCCAGCT CACGGCGGTG GCCGGCGCGG GGCCCCACGA CGCCGCGACG AAGGCGTTCC TGGCGAACCC GGTGACGGTC ACGACCAGCC AGTTCCACCC CCCGCCCGAG AACAGCGCGC TTGGCCTGAG CGCCTTCTAC CTGGCCCTGC TGACCCTCAT GTGCGGGTTC CTGGCCGGGA CCATCCTGCA CGCCACGGTG GACGCGGCAC TCGGCTACGG GACCTCCGAG GTCGGCCCCC GGTGGACCCA GCTCCAGCCG AAGGCGATCA GCCGGTGGCG GACCCTGCTG ATCAAATGGG CGATGGCGGC GGTGCTGACC GCGGTGGTGA CTGGTCTGAT GCTCGCGGTG GCGGCCGGCG CGGTGGGCAT GGACGCTCCG CATCCGCTGC TGTTGTGGCT GTACGCGTGG CTGTGCTCGG CCAGCGTCGC CGCCGGGACG ATCGTGCTCT TCGCGGCGCT CGGTACCCCC GGGCAGCTGG TCGCCATCCT GCTGTTCGTC TACGCCGGTC TGGCCTCGGC TGGCGGGACC GTCCCCGTGG AGGCACTACC CGACTTCTTC CGGCTGCTCA GTGAGGCTGA GCCGCTGCGG CAGATCCTCG CTGGCGACCG GGCAATCCTG TACTTCGGCG CCCAGGCTGA CGCGGGCCTG ACCCGTGGCG TCGTGGCGGC CGCGATCGGC CTGCTCTGCT GGCTCGTCGC GGGCACTCTG ATCGTCCGCT GGTATGACCG CCGGGCGATG CACCGGTTGA CTCCGGAGCT GCTGGCGTAC GTCGATCGCG CCGTCCAGGA CTACCGGGCC CAGGAACGGG CCGAATGA
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Protein sequence | MKRDSLLGPG NGTPRDDFPV RVRDLLRQRA VWVLPLVLAS VVVASMTALY LASAVNPLAH VRGLPVEVVN SDRGATLGTE HLDIGRRIET GLRASPAVSG RLRLEPVTRS EAERAMNRGR AYATVVIPPD FTASLLTQAG LPPAGSSAAG PPSAGTAGAG AIQLLTNPRA GTLGVSLATG ILQPAVATAS RTISGQLTAV AGAGPHDAAT KAFLANPVTV TTSQFHPPPE NSALGLSAFY LALLTLMCGF LAGTILHATV DAALGYGTSE VGPRWTQLQP KAISRWRTLL IKWAMAAVLT AVVTGLMLAV AAGAVGMDAP HPLLLWLYAW LCSASVAAGT IVLFAALGTP GQLVAILLFV YAGLASAGGT VPVEALPDFF RLLSEAEPLR QILAGDRAIL YFGAQADAGL TRGVVAAAIG LLCWLVAGTL IVRWYDRRAM HRLTPELLAY VDRAVQDYRA QERAE
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