| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6226 |
|---|
| Symbol | |
|---|
| ID | 5674545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 7563140 |
|---|
| End bp | 7563598 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641245078 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001510474 |
|---|
| Protein GI | 158317966 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCAACT ACCGCGAACC CGACACGGCG GAGGCGATCG GCAAGGCTGC GCCGGACGGC
GTCCACATCG TCGTCGAGGT GAACCCAGGC GCGAACGCCG AGCTCAACCA GCAGGTCCTG
GCTACCAACG GAGTAGTGGT GATCTACGCC GACGGCGGGA CGCATCTGCC CATCCCGATT
TTGCCGTCCA TGATGTCGAA CACCCGGCTG CAGTTCATCC TCGTCTACAC CATGCCGGAC
ACGGCCAAAC TCCAAGCTGT CAAGGACATC ACAGCAGCGG CAGCAGTCGG CGCGCTGCGC
ATCGGCACGG ACGCCGGTCT CCCGCTACAC CGGTTCCGGC TGGAACAGAC CGCCGCAGCG
CATGACGCAG TCGAGGCAGG CACCGTCGGA AAGGTCCTTG TCGACGTCAC CCATGCCCCG
GAAGATCCCG AACAAGTTCA CCTTCCGGAC GAGGAATAG
|
|---|
| Protein sequence | MVNYREPDTA EAIGKAAPDG VHIVVEVNPG ANAELNQQVL ATNGVVVIYA DGGTHLPIPI
LPSMMSNTRL QFILVYTMPD TAKLQAVKDI TAAAAVGALR IGTDAGLPLH RFRLEQTAAA
HDAVEAGTVG KVLVDVTHAP EDPEQVHLPD EE
|
|---|
| |