Gene Franean1_6220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6220 
Symbol 
ID5674539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7555556 
End bp7556221 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content70% 
IMG OID641245072 
Productzinc finger SWIM domain-containing protein 
Protein accessionYP_001510468 
Protein GI158317960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTGA TCCTTGCCGC GCGTGCCGCC GGGATTGCCT GGCCGGTCAC CTCGGTGCCC 
TCCGCCGGGC CTGTCGCCGG CAAAGAGGAA CGCCTCCTTG AAGAGGCCGC GGTGGCTTTT
ACCCGGGCGG AGCTGATTCA GCTCGTCGCG GCTCGGGCTC TCGAGGACCG GCTGTTCGCG
GCCAGGCTGC TGAGACAGGC CGGCCGGCTC GACCCGGCGG ATCCCGCGGA ACTGGTGCGG
GTTCGCCGGC TTGTGCGGGA GGCCGGTGCG ATCCCGGACA GCAATCCGCG ATGGGATCTG
CACCATCTGG TCGAAGCGGG CCGAGCGATG CTGGCGGAAC TGGAGATTGT CGCGGTCCGG
CCGCCGACCG CGGAGTTCCT CGACGTCGTC GAGGAGGCGG TCAGGGTCTG GGATCGGCTG
GCTGGCCATC TTCATGATGC ATGGGACGTG TACGAGACCG AACCGGGTGA GATCGGCGAG
CCTCTCGCCG CGCTGCACCT GCGGCTGTGC GAGGACCTGC GCCCCGATCC TGTCGACCTC
GGCCGTCGGC TTGCCGCCCT GATCGGCTCC GCCGAAGTCG ACTCCTACCT GCACGCGCTG
GAAGGGTACG CAGACGTCCT CGGCACCGAC GGACTCGCCG CCTACGACAC CGCCTGTCAC
GACTGA
 
Protein sequence
MAVILAARAA GIAWPVTSVP SAGPVAGKEE RLLEEAAVAF TRAELIQLVA ARALEDRLFA 
ARLLRQAGRL DPADPAELVR VRRLVREAGA IPDSNPRWDL HHLVEAGRAM LAELEIVAVR
PPTAEFLDVV EEAVRVWDRL AGHLHDAWDV YETEPGEIGE PLAALHLRLC EDLRPDPVDL
GRRLAALIGS AEVDSYLHAL EGYADVLGTD GLAAYDTACH D