Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6220 |
Symbol | |
ID | 5674539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7555556 |
End bp | 7556221 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641245072 |
Product | zinc finger SWIM domain-containing protein |
Protein accession | YP_001510468 |
Protein GI | 158317960 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGTGA TCCTTGCCGC GCGTGCCGCC GGGATTGCCT GGCCGGTCAC CTCGGTGCCC TCCGCCGGGC CTGTCGCCGG CAAAGAGGAA CGCCTCCTTG AAGAGGCCGC GGTGGCTTTT ACCCGGGCGG AGCTGATTCA GCTCGTCGCG GCTCGGGCTC TCGAGGACCG GCTGTTCGCG GCCAGGCTGC TGAGACAGGC CGGCCGGCTC GACCCGGCGG ATCCCGCGGA ACTGGTGCGG GTTCGCCGGC TTGTGCGGGA GGCCGGTGCG ATCCCGGACA GCAATCCGCG ATGGGATCTG CACCATCTGG TCGAAGCGGG CCGAGCGATG CTGGCGGAAC TGGAGATTGT CGCGGTCCGG CCGCCGACCG CGGAGTTCCT CGACGTCGTC GAGGAGGCGG TCAGGGTCTG GGATCGGCTG GCTGGCCATC TTCATGATGC ATGGGACGTG TACGAGACCG AACCGGGTGA GATCGGCGAG CCTCTCGCCG CGCTGCACCT GCGGCTGTGC GAGGACCTGC GCCCCGATCC TGTCGACCTC GGCCGTCGGC TTGCCGCCCT GATCGGCTCC GCCGAAGTCG ACTCCTACCT GCACGCGCTG GAAGGGTACG CAGACGTCCT CGGCACCGAC GGACTCGCCG CCTACGACAC CGCCTGTCAC GACTGA
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Protein sequence | MAVILAARAA GIAWPVTSVP SAGPVAGKEE RLLEEAAVAF TRAELIQLVA ARALEDRLFA ARLLRQAGRL DPADPAELVR VRRLVREAGA IPDSNPRWDL HHLVEAGRAM LAELEIVAVR PPTAEFLDVV EEAVRVWDRL AGHLHDAWDV YETEPGEIGE PLAALHLRLC EDLRPDPVDL GRRLAALIGS AEVDSYLHAL EGYADVLGTD GLAAYDTACH D
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