Gene Franean1_6216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6216 
Symbol 
ID5674535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7550058 
End bp7550507 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content63% 
IMG OID641245068 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001510464 
Protein GI158317956 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.304536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAGA TCCGATGTTT CTCGCACGTC GGGATGACGG TGGCAGACCT CGACTGTTCA 
GTGGCTTTCT ACACCGGTGT GCTTGGATTC CAGGTCCTTT TCGAAGTACG GGGAAAGGCA
TGGGGGCGCG TCGGCATCGG GATCGACGCG ATGATGCTCG AGCTGTTCAG TCCCCATCCG
ACCGGCGGCC CCAATCCGAC CGGGCAGGCC CTGGAACCGG CCGACATGCT CTACCCCGCG
CCCTATGGTC GCCCGAAGAT GGCTCTGACA GTGGCCGACA TCGACGCCGC CTACGACGAG
CTGGTCAAGC TGTCCGTTCC CGTCATCGGG CCGGTGACCG ACACGGGGAA ATCAAGACTT
TTCTTCGTTC TCGATCCGGA CGGGACGCTG ATCCAGCTCC ATCAGTTCGA CGGGGGGCAG
GAACGCGTGG CAGAACTCTT CGGTCGCTGA
 
Protein sequence
MPEIRCFSHV GMTVADLDCS VAFYTGVLGF QVLFEVRGKA WGRVGIGIDA MMLELFSPHP 
TGGPNPTGQA LEPADMLYPA PYGRPKMALT VADIDAAYDE LVKLSVPVIG PVTDTGKSRL
FFVLDPDGTL IQLHQFDGGQ ERVAELFGR