Gene Franean1_6213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6213 
Symbol 
ID5674532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7547666 
End bp7548700 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content69% 
IMG OID641245065 
Productaldo/keto reductase 
Protein accessionYP_001510461 
Protein GI158317953 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.344018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATC GCAGGTTCGG AACGACCGGC GTCGAGGTGA GCAGCCAGTG CCTGGGCACG 
ATGAACTTCG GCCGGCTGGG TAACGTCGAT CCCGACGACA GCGTGCGGGT CGTCAGCCGC
GCGCTGGACG GTGGGATCAA CTTCATCGAC ACCGCCGACG TGTACTCCCG CGGCGAGAGT
GAGCAGATCG TCGGTCGGGC GGTGGGGTCA CGCCGGGATG ACGTGGTCCT CGCGACCAAG
TGCTTCTTCC CCATGGGCGG CCAGCTTCAG CGGGGTTCCT CACGTCGATG GATCATGCAG
GCTGTCGAGG GCAGCCTGCG CCGGCTGGGC ACCGATCGCA TCGACCTGTA CCAGATACAC
AAGCTCGACT GGAACACCGA TCTGGAGGAG ACCCTCGGTG CCCTGACCGA CCTCGTGCGG
CAGGGCAAGG TCCTCTACCT GGGCTCGTCG TCGTTCCCGG CGGACTGGAT CGTCGAGGCC
CAGTGGACGG CGGCCCGGCG CGGCGGTGAA CGGTTCGTCT GCGAGCAGCC GCAGTACTCG
GTCTTCGCCC GGTCGGTGGA GCAGGCGGTC CTGCCCGCCT GCCAGCGGCA TCGGATGGCG
GTCATCCCCT GGAGCCCACT CGCCGGCGGC TGGCTGACCG GCAAGTACCA GCGCGGCCAG
GAACCGCCGA CCGGCTCACG CTACGACCCG GACAGCCCGT TCATGCAGGG AACCGTCAGC
TCGGCCGAGG ACCGCTCCTC GCCCGCCCGG TTCGACGCCG TCGACGCCCT GCGCGGCGTC
GCCGACCAGG CGGGCATCAC CCTGACCGAG CTGGCCATGG CCTTCGTCGC CAACCACCCC
GCCATCACCT CGACGATCAT CGGGCCGCGC ACCATGAAGC ACCTCGAGGA CGCGCTGAAC
GCGGCGGACG TCGACCTCGA CGAGGACGTC CTCGACGCGA TCGACAAGAT CGTGCCCCCC
GGCACCGACA TGCCCGGGAT CGACCACTTC ACCCAGCACC CGGCCCTCCT GCCCGCCGCC
CGCCGACGCG CATGA
 
Protein sequence
MKYRRFGTTG VEVSSQCLGT MNFGRLGNVD PDDSVRVVSR ALDGGINFID TADVYSRGES 
EQIVGRAVGS RRDDVVLATK CFFPMGGQLQ RGSSRRWIMQ AVEGSLRRLG TDRIDLYQIH
KLDWNTDLEE TLGALTDLVR QGKVLYLGSS SFPADWIVEA QWTAARRGGE RFVCEQPQYS
VFARSVEQAV LPACQRHRMA VIPWSPLAGG WLTGKYQRGQ EPPTGSRYDP DSPFMQGTVS
SAEDRSSPAR FDAVDALRGV ADQAGITLTE LAMAFVANHP AITSTIIGPR TMKHLEDALN
AADVDLDEDV LDAIDKIVPP GTDMPGIDHF TQHPALLPAA RRRA