Gene Franean1_6206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6206 
Symbol 
ID5674526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7540726 
End bp7541466 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID641245058 
ProductDtxR family iron dependent repressor 
Protein accessionYP_001510455 
Protein GI158317947 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.693213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0477636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTCC TCCTGCCAGG CGTTGCGGCG TACTCTGGTT GCGGACGAAG GAGACCGGTG 
ACTGGACTGA TCGACAGTAC CGAGATGTAC CTCCGGACCC TGTATGAACT ACGGGAGGAG
GGCATCACCC CGCTGCGCGC GCGCCTGGTC GAGCGCCTTC ACGTGAGCGC GCCGGCCGCG
AGTGAGTCGA CCGCGCGCCT CGCGAACGAG GGCCTCGTCG CGCTCGCCGA CGACCGGACC
GTGCAGTTCA CGGAGAAGGG CCTGGTCAGA GCGACGGCGG TCATGCGGAA GCACCGCCTG
GCCGAGTTGC TCCTCACCAA GGTCATTGGC CTGGACTGGG CGCTGGTCCA CAACGAGGCC
TGCCGCTGGG AGCATGTGAT CTCGGACGAG GTCGAGGCCC GGCTGACAGT CCTGCTCGGT
GACCCGAAGC GGTGCCCGTT CGGGAACGAG ATCCCGGCGC AGCTCGAGAC GGCGCAGCCG
CCTGGTGTGG CACCGGTGAG CCTGCTCACA TCGGCTGAGC GAAGCAACAC CGGGACCAAG
TCGGTGACGG TGGCCTGGAT CTCGGAGCGC CTCCAGACCG ACGAGGAGGC GATGCGCGTC
CTGCGGGACG CCGCGATCGT GCCCGGGGCA CAGCTCTACC TGAACGCGCG CGGCGACAGG
GTGTACATCG CCAAGCCGGA CGGCGACAGC GAGGCCGAGA TCGACCGCAG CACAGCGGCG
CTCGTCTACG TCAATCACTG A
 
Protein sequence
MRLLLPGVAA YSGCGRRRPV TGLIDSTEMY LRTLYELREE GITPLRARLV ERLHVSAPAA 
SESTARLANE GLVALADDRT VQFTEKGLVR ATAVMRKHRL AELLLTKVIG LDWALVHNEA
CRWEHVISDE VEARLTVLLG DPKRCPFGNE IPAQLETAQP PGVAPVSLLT SAERSNTGTK
SVTVAWISER LQTDEEAMRV LRDAAIVPGA QLYLNARGDR VYIAKPDGDS EAEIDRSTAA
LVYVNH