Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6206 |
Symbol | |
ID | 5674526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7540726 |
End bp | 7541466 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641245058 |
Product | DtxR family iron dependent repressor |
Protein accession | YP_001510455 |
Protein GI | 158317947 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.693213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0477636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTCC TCCTGCCAGG CGTTGCGGCG TACTCTGGTT GCGGACGAAG GAGACCGGTG ACTGGACTGA TCGACAGTAC CGAGATGTAC CTCCGGACCC TGTATGAACT ACGGGAGGAG GGCATCACCC CGCTGCGCGC GCGCCTGGTC GAGCGCCTTC ACGTGAGCGC GCCGGCCGCG AGTGAGTCGA CCGCGCGCCT CGCGAACGAG GGCCTCGTCG CGCTCGCCGA CGACCGGACC GTGCAGTTCA CGGAGAAGGG CCTGGTCAGA GCGACGGCGG TCATGCGGAA GCACCGCCTG GCCGAGTTGC TCCTCACCAA GGTCATTGGC CTGGACTGGG CGCTGGTCCA CAACGAGGCC TGCCGCTGGG AGCATGTGAT CTCGGACGAG GTCGAGGCCC GGCTGACAGT CCTGCTCGGT GACCCGAAGC GGTGCCCGTT CGGGAACGAG ATCCCGGCGC AGCTCGAGAC GGCGCAGCCG CCTGGTGTGG CACCGGTGAG CCTGCTCACA TCGGCTGAGC GAAGCAACAC CGGGACCAAG TCGGTGACGG TGGCCTGGAT CTCGGAGCGC CTCCAGACCG ACGAGGAGGC GATGCGCGTC CTGCGGGACG CCGCGATCGT GCCCGGGGCA CAGCTCTACC TGAACGCGCG CGGCGACAGG GTGTACATCG CCAAGCCGGA CGGCGACAGC GAGGCCGAGA TCGACCGCAG CACAGCGGCG CTCGTCTACG TCAATCACTG A
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Protein sequence | MRLLLPGVAA YSGCGRRRPV TGLIDSTEMY LRTLYELREE GITPLRARLV ERLHVSAPAA SESTARLANE GLVALADDRT VQFTEKGLVR ATAVMRKHRL AELLLTKVIG LDWALVHNEA CRWEHVISDE VEARLTVLLG DPKRCPFGNE IPAQLETAQP PGVAPVSLLT SAERSNTGTK SVTVAWISER LQTDEEAMRV LRDAAIVPGA QLYLNARGDR VYIAKPDGDS EAEIDRSTAA LVYVNH
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