Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6192 |
Symbol | |
ID | 5674513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 7524530 |
End bp | 7525528 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641245044 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001510442 |
Protein GI | 158317934 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0225613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTC CGCGGCGTCA GGCGATCAAG ATCGGTGCCT ATCTGCTGAA GCAGAAAATC GCACGTCGAG ACAAGTTCCC GATCACGCTC GAGCTGGAAC CGCTGTTCGC GTGCAACCTC TCCTGCGAGG GCTGCGGCAA GATCCAGCAC CCCGCGGACG TCCTCAAGCA GCGCATGCCG GTCGAGCAGG CGCTCGCCGC CGTCGACGAG TGCGGCGCGC CCGTCGTGTG TCTGGCGGGT GGCGAGCCGC TGATGCACCC ACAGATCGAG CAGATCGTGG AAGGCCTGGT CAAGCGCAAG AAGTTCATCT ACCTCTGCAC GAACGCGGTA CTGCTCCCAC GCAAGATCGA CAAGCTGAAG CCCTCGCCGT ACCTGTCGCT CGCGGTGCAC ATCGACGGGC TCGAGGACCG CCACGACGAG TCCGTGGCGA AGAAGGGCGT CTTCGCCCAG GCCGTCGACG CGATCAAGGA CGCGCAGGAC CGCGGATTCC GGGTGACGAC GAACACCACG TTCTTCAACA CCGACACCCC GCAAACCGTC ATCGAGGTGC TGGACTTCCT GAACAACGAC CTCAATGTCG ACGGCATGAT GCTCTCGCCG GCCTATGCCT ACGAGAAGGC CCCTGAGCAG GACAAGTTCC TGGGCGTCAA GGAGACTCAG GAGCTTTTCC GCAAGGCGTT CGCCGACGGT CGGCGCAAGC GCTGGCGCAT CCAGCACTCG CCGCTGTTCC TCGACTTCCT TGAGGGCAAG GTCGACTTCC CCTGCACCGC GTGGGGAATT CCGTCGTACT CCCTCTACGG CTGGCAGAAG CCGTGCTATC TGATGGGTGA CGGATACGCC TCGAGCTACC AGGAGCTTCT CGACACCACC GACTGGGAGT CGTACGGCCG TGGCCGCGAC CCCCGCTGCG AGAACTGCAT GGCCCACTGC GGCTACGAGC CGACGGCCAT CGCCGCCACG CTGACCTCGC TGCGGGAGTC CATCCGCGCG ACGCGCTGA
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Protein sequence | MSIPRRQAIK IGAYLLKQKI ARRDKFPITL ELEPLFACNL SCEGCGKIQH PADVLKQRMP VEQALAAVDE CGAPVVCLAG GEPLMHPQIE QIVEGLVKRK KFIYLCTNAV LLPRKIDKLK PSPYLSLAVH IDGLEDRHDE SVAKKGVFAQ AVDAIKDAQD RGFRVTTNTT FFNTDTPQTV IEVLDFLNND LNVDGMMLSP AYAYEKAPEQ DKFLGVKETQ ELFRKAFADG RRKRWRIQHS PLFLDFLEGK VDFPCTAWGI PSYSLYGWQK PCYLMGDGYA SSYQELLDTT DWESYGRGRD PRCENCMAHC GYEPTAIAAT LTSLRESIRA TR
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