Gene Franean1_6185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6185 
Symbol 
ID5674506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7514538 
End bp7515332 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content72% 
IMG OID641245037 
Producthypothetical protein 
Protein accessionYP_001510435 
Protein GI158317927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.3632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0972683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA CCGCCACGAG AACCGGTGGC CCTGGCGCGG TGACACCGCG GCCGGCCGCC 
GTCCCGATCC CGTTCGCCCG GCTGGTGCGG GTGGAGTGGG ACAAGTGCCT GGGCACCCGC
GCCACGCGAT GGCTGCTGGC CGTCGCCACC GCCGTGTCCG TCCTGTGCCA GCTGGTCCCG
CTCCTGCTCC CGGACGACGT CGACCAGTGG GCATCGGTCT ATCTCGGCCT CGGCTCGGTC
GGGTTCGGCG TGCTGCTGCC GGTCGTCGTG ATCCTGGCGC TGACCAGCGA GTGGACACAG
CGCACGGTGC TGGTGACCTT CACCCAGGAG CCACGCCGCG CGCGGGTGCT CACCGCGAAG
ATCACGGTCG GCGTGATCCT GGCCCTGCTC GTGGTCGTCG CGACCTTCGC GATCGCGCTG
GGCGGGATGG CGGTCGCCGA GTGGGGGCTG GGCCGCTCGG TCGTCGCCGA CCGCCCGTGG
GGCCTGCTCG TCCTGGGGCT CGTGCTCGCC TCGGTGGTCG GGACGGTCTC GGCGATGGGT
TTCGCGGCGC TGTTCGGCTC GAGCGCGGCC GCGATCGTGA GCGTCTACCT CATCCCGACC
CTGTGGGGCG TCGTCTTCTC GTTCGGAGTG CTGCGGAAGC TGAGTCCGTG GCTGGACAGC
GCGCAGTCGG TGACCTGGAT GCAGGAGGCG CGGTTCGACG GCCATCTCGG CCAGATGGCC
GTCTCGTCTG CGCTGTGGGT CCTGGTGCCG CTGGTGGCCG GCTTCGTCCG CACCCTGCGC
CGCGAGGTCT CCTGA
 
Protein sequence
MTVTATRTGG PGAVTPRPAA VPIPFARLVR VEWDKCLGTR ATRWLLAVAT AVSVLCQLVP 
LLLPDDVDQW ASVYLGLGSV GFGVLLPVVV ILALTSEWTQ RTVLVTFTQE PRRARVLTAK
ITVGVILALL VVVATFAIAL GGMAVAEWGL GRSVVADRPW GLLVLGLVLA SVVGTVSAMG
FAALFGSSAA AIVSVYLIPT LWGVVFSFGV LRKLSPWLDS AQSVTWMQEA RFDGHLGQMA
VSSALWVLVP LVAGFVRTLR REVS