| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6183 |
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| Symbol | |
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| ID | 5674504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7512527 |
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| End bp | 7513894 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641245035 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_001510433 |
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| Protein GI | 158317925 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.95287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.101949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAACG CCACCGGCAT TCTCCTGCAC GACGGCCTCG GCCGCGCGCC GCTGTCCCCG
GCGGCCCGCA CCGCGCTCGA CGCCGCGGCC GGGACCTGCG ACGTCGAGGT CGACCTGGCC
ACGGGTCGCC GCGGCCGGCG CGGCCGCACG ACGATGACCG CGCTGGCCGC GGCCGTGCCA
ATGGCCCGTT CCGTGCACGT GGTCAACAAC AACGCGGCCG CGCTCATCCT GTCGGCCGCG
GCGCTCGCGG GCCGCCGGGA GATAGTCGTC AGCCGCGGCG AGCTCATCGA GACAGCCGAC
GGGCTCCGCC TGCCCGAGCT GCTGACGTCG ACCGGAGCCC GGCTGCGCGA GGTTGGGACC
ACAAATCGGA CCACACTCGG CGACTACGCC GACGCCATCG GGCCAGGCAC CGGTTTCGTA
CTTCGTATAC ATCCGCCCAG CTACCGGGTC GTCGGGCTGA CGGCGGCCCC GGCGCTCGCC
GATCTCGCCG AGCTGTGCGC CGGCCGCGGT GTGCCACTCG TCGGCGATCC CGGATCCGGA
CTGCTGCACC CCGAGCCCGC CCTGCCCGAC GAACCGGACG CCTCGACCTG GCTGAGCTGC
GGGGTCAGCC TGGTCATCAC CTGCGGCGAC AAGCTTCTCG GCGGGCCGCA GTGCGGCCTC
GTCCTGGGCC GCGCGGACCT GGTCGACCGG CTGCGCCGGC ATCCGCTCGC CCGCGCCCTG
CGAGTGGGCA AACTGACGTT GGCCGCGCTG GAGGCCACGC TGGGCACCGG GGACAACCCC
GTCCGCAGGT CGCTGCGCGC CGAGCCCGCC GAGCTGCGGC ACCGGGCCGA GCGGCTGGCG
TCCTGGCTGC GGCAGTCCGG GGTCCCTGCC TCCGCCGTGA CCAGCCGGGC GGTCGTCGGC
TCGGACGGCA TCGACGACAC CGCCCGGGCC GGGGCCGCCG TGCGCCGCGG CGCCGTCGGA
GTCGGAGCGG GCCACGGCGG CCACACAGTC TACGGGTCGG GGCCGGACGT GTGGGAGAGC
GGCCTGCCGA GTGCGGCCGT CGCGCTGGAC GCGGCCCTGG CCGCCTTCCT GCGCCGCGGC
CGCCCGTCCG TCCTCGGACG GGTCGAGCAG GGCTGCTGCC TGCTGGATCT GCGGTCGGTT
CCACCGGACC TGGACCCCGT CCTCGCCGCG ACGGTGCTCG CCGCCGCGGC CGAGTCGGGT
ACCGCCACCG CCGGCGACAT CCACGCGCTC TCCGCGGACG CGCCCGCCTC CGCCGTCCCT
TCGGCGGCCA CCGGCTGGAC GGATCCGGCA CGCCGGGAGG ATCCGGCGGG CTGGGAAGGG
CCGGGCGCCG ACGCCGGGTC CGACGTCGAC GCGGTCACCT TGCAGTGA
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| Protein sequence | MINATGILLH DGLGRAPLSP AARTALDAAA GTCDVEVDLA TGRRGRRGRT TMTALAAAVP
MARSVHVVNN NAAALILSAA ALAGRREIVV SRGELIETAD GLRLPELLTS TGARLREVGT
TNRTTLGDYA DAIGPGTGFV LRIHPPSYRV VGLTAAPALA DLAELCAGRG VPLVGDPGSG
LLHPEPALPD EPDASTWLSC GVSLVITCGD KLLGGPQCGL VLGRADLVDR LRRHPLARAL
RVGKLTLAAL EATLGTGDNP VRRSLRAEPA ELRHRAERLA SWLRQSGVPA SAVTSRAVVG
SDGIDDTARA GAAVRRGAVG VGAGHGGHTV YGSGPDVWES GLPSAAVALD AALAAFLRRG
RPSVLGRVEQ GCCLLDLRSV PPDLDPVLAA TVLAAAAESG TATAGDIHAL SADAPASAVP
SAATGWTDPA RREDPAGWEG PGADAGSDVD AVTLQ
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