Gene Franean1_6166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6166 
Symbol 
ID5674487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7498835 
End bp7499275 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content73% 
IMG OID641245018 
Producthypothetical protein 
Protein accessionYP_001510416 
Protein GI158317908 
COG category[R] General function prediction only 
COG ID[COG2044] Predicted peroxiredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.296416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGTCC GCCACCAGCC ACCAGCTACC AGCTACCAGC CGCCGGCCCG CGGCGGCCCG 
GCACGGCACA CTGGACGGGT GACCCGTTCG CTGCTCGTCA AGGTGACCGC CGGCGCCGAC
GCCCCGGAAC GCTGCTCCCA GGCTTTCACC GTAGCCTCGG TGGCCGTCGC GTCCGGCGTG
GATGTCTCCC TGTGGCTCAC CGGCGAATCG GCCTGGTTCG CGCTCCCGGG GCGTGCCGCG
GAGTTCTCAC TGCCGGAGGC CGCGCCGTTG AACGATCTTC TCGACGCGAT TCTCGCCGCC
GGCCGGGTGA CCCTGTGCAC GCAGTGCGCC GCCCGCCGGT CGATCGGCCC GGACGACGTC
ATTCCCGGGG TCCGCATCGC CGGGGCGGCC GTCTTCGTGA GCGAGGCGCT CGCCGACGAC
GTCCAGGCGC TCGTCTACTG A
 
Protein sequence
MRVRHQPPAT SYQPPARGGP ARHTGRVTRS LLVKVTAGAD APERCSQAFT VASVAVASGV 
DVSLWLTGES AWFALPGRAA EFSLPEAAPL NDLLDAILAA GRVTLCTQCA ARRSIGPDDV
IPGVRIAGAA VFVSEALADD VQALVY