Gene Franean1_6163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6163 
Symbol 
ID5674484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7497451 
End bp7497945 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content71% 
IMG OID641245015 
Producthypothetical protein 
Protein accessionYP_001510413 
Protein GI158317905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.160628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAC CCATCGACGG CGCGGAACGC GAACGGCTCG ACAAGCTGAT CAGTACCGCC 
CTGGACGACC TCGGCGTGGC CTACGAGCAC CCCGACACCG GCGCCTTCCT GGTCACGCTC
GAAGGCGAGC ACAAGCTGCG CACCATGACC TGGCTCGTGG TCCAGGACCA CACGCTGCTC
GTCGAGGCGT TCTTCATGCG CGCGCCCGCC GAGAACGCCG CCGGTACCTA CGGCTTCCTG
CTCAGCCGGA ACGCCCGCAC CTACGGCGTG CACTTCTCGA TCGACCCCGT CGGCGACATC
TTCCTGACCG GCCAGGTCTC GCTGACCGCG GTCACCGCCG AGGAGGTCGA CCGCCTCCTC
GGCTGCGTCG GCTCCTACGC CGACGACAAC TTCGACCCGG CCATCGCGCT CGGCTTCGCC
GGCGCCATCG AGCGCGAACG CGCCTGGCGC GCCAGGCTGG CCGCCGACGC CGGCACCGCC
CCCCGCCCCA CCTGA
 
Protein sequence
MTAPIDGAER ERLDKLISTA LDDLGVAYEH PDTGAFLVTL EGEHKLRTMT WLVVQDHTLL 
VEAFFMRAPA ENAAGTYGFL LSRNARTYGV HFSIDPVGDI FLTGQVSLTA VTAEEVDRLL
GCVGSYADDN FDPAIALGFA GAIERERAWR ARLAADAGTA PRPT