Gene Franean1_6161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6161 
Symbol 
ID5674482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7494895 
End bp7495722 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content78% 
IMG OID641245013 
Producthypothetical protein 
Protein accessionYP_001510411 
Protein GI158317903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.823489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.166118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGTCG CGCGGCGGCC GCCGAGGCTG GCGGCGGGGC GGGCGCGGGC GCTCGGACTG 
CCCACCCGGG GCACGACGGC GCCGAACCGG CTGCGCCGCG TCGACCGGTG GCTGACCTCG
GCGGCCTGGT CGGCGTTGCG CGCCGCCGAG GACCCGCTCG TGGTCGACCT CGGGTTCGGG
TCGTCGCCGG TCACCACCGT CGAGATGTAC GACCGGCTGC GGCCGGTGCG GCCCCACCTG
CGGGTGGTCG GGCTCGAGCT GGACCAGGGG CGGGTGGCCG CGGCGGCGCC GGCGGCCCGT
CCGCCGGGGC TGGCGTTCGC GCGCGGCGGC TTCGAGCTCG CCGGACTGCG CCCGGTGGTG
GTGCGGGCGA TGAACGTGCT GCGCCAGTAC GACGAGGAGG CGGTCGGCGC GGCGTGGGCG
GCGATGGCCG GTCGGCTGCA GAACGGCGGG CTGCTGGTCG AGGGGACCTG CGACGAGATC
GGCCGACGGG CGTGCTGGTT CGCGGTCCCG CCCGGCGGAG TGCCCCGGAC GCTGACCCTG
TCGGCACACC TGCCGAGCCT GGCCCGCCCG TCCGACCTGG CGCCGCGGCT GCCGAAGGCG
CTGATCGCGC GCAACGTGCC CGGTGAGGAC GTCCATGACC TGCTCGCGGC GTTGGATCTG
GCCTGGGAGC GGGCGGCTCC GCGTGGTCCG TTCGGGCCAC GTCAGCGCTG GATCGGCGCC
GTCGAGCTGC TGCGGCGGGA CGGCTGGTCG GTGCTGGACG GCCCGCGCCG GTGGCGCCTC
GGCGAGCTCA CCGTCGCCTG GCCACCCCGC CCGCCGCGGA CGTCCTGA
 
Protein sequence
MTVARRPPRL AAGRARALGL PTRGTTAPNR LRRVDRWLTS AAWSALRAAE DPLVVDLGFG 
SSPVTTVEMY DRLRPVRPHL RVVGLELDQG RVAAAAPAAR PPGLAFARGG FELAGLRPVV
VRAMNVLRQY DEEAVGAAWA AMAGRLQNGG LLVEGTCDEI GRRACWFAVP PGGVPRTLTL
SAHLPSLARP SDLAPRLPKA LIARNVPGED VHDLLAALDL AWERAAPRGP FGPRQRWIGA
VELLRRDGWS VLDGPRRWRL GELTVAWPPR PPRTS