Gene Franean1_6160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6160 
Symbol 
ID5674481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7494364 
End bp7494888 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content74% 
IMG OID641245012 
Producthypothetical protein 
Protein accessionYP_001510410 
Protein GI158317902 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.506292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.273522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACGG TGAGGCTAGT TCAGGGCGAC ATCACCACCC AGGCCGTGGA CGCGATCGTC 
AACGCCGCCA AATCGTCGCT GCTTGGTGGC GGCGGCGTCG ACGGGGCGAT CCACGCCGCC
GGCGGACCCG ACATCCTGGC CGCCTGCCGC CGTCTTCGGG CCGGTGCCCT GCCCGGCGGG
CTACCCGTCG GCGAGGCCGT CGCGACCACC GCCGGCCGGC TCACCGCGAA GCACGTCATC
CACACCGTCG GGCCGGTCCA CACCCCCCAC GAGGACCGGT CCCACCTGCT CCGGTCGTGC
TACGCGCGTT CCCTGGCCGT CGCGGACGAG ATCGGGGCCC GGACCCTCGC GCTGCCCGCG
GTGAGCGCGG GGGCCTACGG CTGGCCGGCC CGCGACGCCG CCGGCATCGC CGTGACCACC
GTGCTCACCA CCCCCAGCTC GGTCACCGAG GCCCGCTTCG TCCTGTTCGA CCAGGCCATG
CTGCGGATCT TCAACGAAGC CCTCGAGAAC GCCACGACCG GCTGA
 
Protein sequence
MVTVRLVQGD ITTQAVDAIV NAAKSSLLGG GGVDGAIHAA GGPDILAACR RLRAGALPGG 
LPVGEAVATT AGRLTAKHVI HTVGPVHTPH EDRSHLLRSC YARSLAVADE IGARTLALPA
VSAGAYGWPA RDAAGIAVTT VLTTPSSVTE ARFVLFDQAM LRIFNEALEN ATTG