Gene Franean1_6148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6148 
SymbolgpmA 
ID5674469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7480340 
End bp7481077 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content71% 
IMG OID641245000 
Productphosphoglyceromutase 
Protein accessionYP_001510398 
Protein GI158317890 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0588] Phosphoglycerate mutase 1 
TIGRFAM ID[TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.334482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.848752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGC TCGTCCTGCT CCGCCACGGC GAGAGCACGT GGAACCGTGA GAACCTGTTC 
ACCGGCTGGG TGGACGTCGA TCTGTCCGAG AAGGGCCTCA AGGAGGCCAC GCGCGGCGGG
GAGCTGCTCC AGGAGGCGGG CGTCCTGCCC GACGTGGTGC ACACCTCGCT GCTCACCCGG
GCCATCCGCA CCGCGTGGCT CGCCCTGGAC GCGGCCGGCC GCACCTGGGT GCCGGTGCGC
CGCAGCTGGC GTCTCAACGA GCGGCACTAC GGCGGCCTGC AGGGGCTGAA CAAGGCGGAG
ACCCTGGCGA AGTTCGGCGA CGAGCAGTTC CTGCTCTGGC GCCGCTCCTA CGACACGCCG
CCGCCGCCCA TCGAGCCGGG CCAGCCGAGC GGCGTCGACG AGCGGTACGC CGACCTCGCT
CCCGATGTGA TCCCGCTCAC CGAATGCCTG CGCGACGTCG TTGTCCGGAT GCTGCCCTAC
TGGTATGACT CGATCGTCCC GGACCTGCGC TCCGGCGCGA CGGTGCTCGT CACGGCGCAC
GGGAACTCGC TGCGGGCGCT GGTCAAGCAC CTCGACGGGA TCTCCGACAC CGACATCGCG
AACCTGAACA TCCCGACCGG CATCCCGCTG CGCTACGAGC TGGACGACGA TCTCAAGGTG
CTGGACTCGG GCTATCTCGA CCCGGCCGCG GCGGAGACCG CCGCCGCGGC CGTCGCGGCT
CAGGGCAAGA AGAAGTAG
 
Protein sequence
MPTLVLLRHG ESTWNRENLF TGWVDVDLSE KGLKEATRGG ELLQEAGVLP DVVHTSLLTR 
AIRTAWLALD AAGRTWVPVR RSWRLNERHY GGLQGLNKAE TLAKFGDEQF LLWRRSYDTP
PPPIEPGQPS GVDERYADLA PDVIPLTECL RDVVVRMLPY WYDSIVPDLR SGATVLVTAH
GNSLRALVKH LDGISDTDIA NLNIPTGIPL RYELDDDLKV LDSGYLDPAA AETAAAAVAA
QGKKK