Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_6148 |
Symbol | gpmA |
ID | 5674469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 7480340 |
End bp | 7481077 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641245000 |
Product | phosphoglyceromutase |
Protein accession | YP_001510398 |
Protein GI | 158317890 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0588] Phosphoglycerate mutase 1 |
TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.334482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.848752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACGC TCGTCCTGCT CCGCCACGGC GAGAGCACGT GGAACCGTGA GAACCTGTTC ACCGGCTGGG TGGACGTCGA TCTGTCCGAG AAGGGCCTCA AGGAGGCCAC GCGCGGCGGG GAGCTGCTCC AGGAGGCGGG CGTCCTGCCC GACGTGGTGC ACACCTCGCT GCTCACCCGG GCCATCCGCA CCGCGTGGCT CGCCCTGGAC GCGGCCGGCC GCACCTGGGT GCCGGTGCGC CGCAGCTGGC GTCTCAACGA GCGGCACTAC GGCGGCCTGC AGGGGCTGAA CAAGGCGGAG ACCCTGGCGA AGTTCGGCGA CGAGCAGTTC CTGCTCTGGC GCCGCTCCTA CGACACGCCG CCGCCGCCCA TCGAGCCGGG CCAGCCGAGC GGCGTCGACG AGCGGTACGC CGACCTCGCT CCCGATGTGA TCCCGCTCAC CGAATGCCTG CGCGACGTCG TTGTCCGGAT GCTGCCCTAC TGGTATGACT CGATCGTCCC GGACCTGCGC TCCGGCGCGA CGGTGCTCGT CACGGCGCAC GGGAACTCGC TGCGGGCGCT GGTCAAGCAC CTCGACGGGA TCTCCGACAC CGACATCGCG AACCTGAACA TCCCGACCGG CATCCCGCTG CGCTACGAGC TGGACGACGA TCTCAAGGTG CTGGACTCGG GCTATCTCGA CCCGGCCGCG GCGGAGACCG CCGCCGCGGC CGTCGCGGCT CAGGGCAAGA AGAAGTAG
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Protein sequence | MPTLVLLRHG ESTWNRENLF TGWVDVDLSE KGLKEATRGG ELLQEAGVLP DVVHTSLLTR AIRTAWLALD AAGRTWVPVR RSWRLNERHY GGLQGLNKAE TLAKFGDEQF LLWRRSYDTP PPPIEPGQPS GVDERYADLA PDVIPLTECL RDVVVRMLPY WYDSIVPDLR SGATVLVTAH GNSLRALVKH LDGISDTDIA NLNIPTGIPL RYELDDDLKV LDSGYLDPAA AETAAAAVAA QGKKK
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