Gene Franean1_6144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6144 
Symbol 
ID5674465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7475422 
End bp7476390 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content74% 
IMG OID641244996 
ProductPpx/GppA phosphatase 
Protein accessionYP_001510394 
Protein GI158317886 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCG GTGTGATCGA CATCGGGTCG AACACCGTCC ACCTGCTGGT GGTGGACGCG 
CACCGGGGCG GCCAGCCGCA GCCGGCGGCG AGCGTGCGGG TGCCGTTGCG TCTGGTCGAG
CTGCTCGACG ACGACGGGCG GTTGGCCGAG CGTGGTGAAC AGGCGCTGAC CGACTGCATC
CAGCAGCTGC GGGCGCACGC CCAGGACCTG CACGTGGTCG ACCTGGTCGC CTTCGCCACG
TCAGCCGTCC GGGAGGCCCC GGACGGGGAC GAGGTGCTGA CGCGGGTACG CGCCGACACC
GGGCTGGAGG TCGCCGTCCT GCCGGGTGAG GCCGAGGCGC GGCTCACCTT CCTGGCGGTG
CGCCGGTGGT TCGGCTGGAG CGCGGGACGG TTGCTCGCGC TCGACATCGG CGGCGGCTCG
CTGGAGATCG GCGCGGGCAT GCACGAGGAC CCCGAGGTCG TCGCCTCCCT CCCGCTCGGC
GCGAGCCGGC TGACCAGGGA CTGGCTCAGC GAGAACGACC CGCCCAAGCG TTCGGAGCTC
AACGCGCTGC GCCGCTATGT CCGGGCGCAG ATCGCGCCGG TCGTCGGGTC GCTGTACCAC
GTGGGCGAGC CGACCCGGGC GGTGGCGACG TCCAAGACTT TCCGCTCGCT GGCCCGTGTC
TCCGGCGCCG CGCCCTACGG CCGCGGGCCG TACGTGCGGC GGGTCCTGCG CCGGGAGGAC
CTCGTGGAGG TGGCCGCGCG GGTGTGCCGG ATGTCGGCCG CCGAGCGCGC GGCGCTGCCG
GGTGTCTCCG CGTCGCGGGC CAGTCAGCTG GTCGCGGGCG CCGTCGTGGC GGCCGAGGCG
CTGGATCTGT TCAACCTCGA GGAGGTGGAG ATCTGCCCCT GGGCGCTGCG CGAGGGGGTG
ATCCTGCGCC GGCTCGACCT GCTGACCTCG GGACTGGACG GCCCGCGTTC ACTTCCACCG
GCGCGGTAG
 
Protein sequence
MRLGVIDIGS NTVHLLVVDA HRGGQPQPAA SVRVPLRLVE LLDDDGRLAE RGEQALTDCI 
QQLRAHAQDL HVVDLVAFAT SAVREAPDGD EVLTRVRADT GLEVAVLPGE AEARLTFLAV
RRWFGWSAGR LLALDIGGGS LEIGAGMHED PEVVASLPLG ASRLTRDWLS ENDPPKRSEL
NALRRYVRAQ IAPVVGSLYH VGEPTRAVAT SKTFRSLARV SGAAPYGRGP YVRRVLRRED
LVEVAARVCR MSAAERAALP GVSASRASQL VAGAVVAAEA LDLFNLEEVE ICPWALREGV
ILRRLDLLTS GLDGPRSLPP AR