Gene Franean1_6138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6138 
Symbol 
ID5674459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7468145 
End bp7469059 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content73% 
IMG OID641244990 
Producthypothetical protein 
Protein accessionYP_001510388 
Protein GI158317880 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.500966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.916687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCT GGTTGCACGG TCGGCAACGA CGCCGTCCGG GCGCAGGGGG TCACATGGGC 
AGCGCGTGGA TCACATTCAT GTCCGACTAC GGAGTTGACG GCGCCTGCGT CGGCGTCTGT
CACGGGATCA TCGCCCGGCA CGCGCCGGAC GCCCGGGTCA TCGACCTGTG CCACTCGATC
GCGCCGCAGG ACATCGGCCA GGCGGCCGTG ACGCTGGTCG GCGCGGTCGG CTACCTGCCG
AGGGGAATCC ACCTCGTGGT CGTCGAGCAG CTCGACGCCA GCGGCTACAC CCGCGGTGTC
GTCGCCCGCG CCGCGGACGG ATCGACGTTC GTCGCCCCGG ACAACGGCGT CGCCTCGCTG
GGCTGGGAGG CCCTGGGCGG CGTCGAGGAG GCCTACGAGA TCTCCAACCC GGACCTCTGG
CTCCCGCTGC CCACCGCCGT CTTCCGCGGC CGTGACGTCT ACGCGCCGGT CGTGGCGCGG
CTCGCGACGG GCCTGCCTCC GGCTGACGTC GGCCCCAGGA TCGACCCGGG GGAGCTGGTC
GTCGTGGAGC CACGGGTGTG CCACGTGGAC GACGACCACG TCCACGGCGA GGTGGTCTCG
GTGGACCACT TCGGGAACCT CTCGTTGAAC ATGACCAGGG CCGAGCTCGA GGCCGCCGGC
ATCCTGCTCG GGGACAGGGT GGAGGTGCGC GCCGACGGTC GGCTGCTCAC CATGCCCTTC
GCGCACACCT ACGGCGAGGT CCCGCCCGGC GAGATCGCGC TCTGCGAGGA CGCGCTGCGC
CAGGTCATGA TCGCGGTGAA CTGCGGCCGG GCGGCCGAGG TGCTGCGCCT GCGGCGCGGC
GACGCCGTCG TCGTCGCCCA GGTCCCCCGG GACGGCGCCC GGATCCCGGT GAGCGCGGTG
CGTGGGCTCG CCTGA
 
Protein sequence
MAGWLHGRQR RRPGAGGHMG SAWITFMSDY GVDGACVGVC HGIIARHAPD ARVIDLCHSI 
APQDIGQAAV TLVGAVGYLP RGIHLVVVEQ LDASGYTRGV VARAADGSTF VAPDNGVASL
GWEALGGVEE AYEISNPDLW LPLPTAVFRG RDVYAPVVAR LATGLPPADV GPRIDPGELV
VVEPRVCHVD DDHVHGEVVS VDHFGNLSLN MTRAELEAAG ILLGDRVEVR ADGRLLTMPF
AHTYGEVPPG EIALCEDALR QVMIAVNCGR AAEVLRLRRG DAVVVAQVPR DGARIPVSAV
RGLA