Gene Franean1_6121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6121 
Symbol 
ID5674442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7449005 
End bp7449940 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content76% 
IMG OID641244973 
Productmethyltransferase type 11 
Protein accessionYP_001510371 
Protein GI158317863 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.962234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCATC CAGCTCTGCG CCTCCTGCGG TGCCCCGTCT GCGCGGCGCC CCTGGCCGAC 
CCGGCGGGTG CCGTGCGGTG CGCCGCGGGG CACTCCTTCG ACGTCGAACG GTCCGGCTAC
CTGAACCTGC GTACGGGCCG GGCCCGCCGG GTGTCCGGGG ACACCGCCGA GATGGTCCAG
GCCCGGGTCG ACTTCCTCGG GGGTGGCCAC TACGCGCCGC TCACCGCCCG CCTGGTCCAA
CTTGCCGCGG CCCGGACGGG GGGCGGGCGG ACGCCGGCCG ATGCTCCGCC AGCCGATCAC
CCGGCGGTCA GTGATCCGGC GGCAGGTGAT CCGGCGGCCG GTGCTCCCGA GCTCGTGCTG
GAGATCGGCG CCGGCACCGC CCACCACCTC GCGGCCGTCG TGGACGCGGG GCCGCGGCGG
CTCGGGATCG CCGTCGACGT GTCGAAGTAC GCGCTGCGCC GCGCGGCACG GGCCCATCCG
CGAATCGGTG CCGTGGCCTT CGACGTGGCC GACCGCTGGC CGCTGCCCGA CGCGTCCGTC
GACGTCCTGC TGGACGTCTT CGCGCCGCGC AACCTCGCGG AGATGCGCCG GCTGCTGCGT
CCGGGGGGCA TGCTGCTCCT GGTCACACCC GGCGAGGGTC ACCTGGCGGA GCTACGGGAG
CCGCTCGGGC TCGTCGGCGT CCAGCCGGGT AAGCGGGAAC GGCTGGCGGA CGAGCTGTCC
GGCCGGTTCG ACCGGCTCTC GTCCGAGACG CTGACCCGTA CCCTCCAGCT CGGCGTGGAC
GAGGTCGTCG ACGTGGCTCT CATGGGCCCC ACCGGGCATC ACACGGGCGC GCCCGAGCTG
CGCCGGCGCC TGGCCGCGGT GTGGCCCCCC GGCCGGGCCG CGATGGACGT CACCGCCTCC
TTCGTCATCG ACCGCGCGCA GGCGCCCGAG GCCTGA
 
Protein sequence
MIHPALRLLR CPVCAAPLAD PAGAVRCAAG HSFDVERSGY LNLRTGRARR VSGDTAEMVQ 
ARVDFLGGGH YAPLTARLVQ LAAARTGGGR TPADAPPADH PAVSDPAAGD PAAGAPELVL
EIGAGTAHHL AAVVDAGPRR LGIAVDVSKY ALRRAARAHP RIGAVAFDVA DRWPLPDASV
DVLLDVFAPR NLAEMRRLLR PGGMLLLVTP GEGHLAELRE PLGLVGVQPG KRERLADELS
GRFDRLSSET LTRTLQLGVD EVVDVALMGP TGHHTGAPEL RRRLAAVWPP GRAAMDVTAS
FVIDRAQAPE A