Gene Franean1_6118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6118 
Symbol 
ID5674439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7444988 
End bp7446679 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content72% 
IMG OID641244970 
ProductResB family protein 
Protein accessionYP_001510368 
Protein GI158317860 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1333] ResB protein required for cytochrome c biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0678882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.526462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCG CGCTGGTGCT GCTCTTCCTG CTCGCGCTGG CCGCGGTGCC CGGCTCGCTC 
ATCCCCCAGC GCAACCTCAA CCCGATGAAG GTCGAGGAGT ACTTCGCCGA GCACCCCACG
CTCGCCCCCT GGCTCGACCG GTTCTCCGCC TTCCACGTCT TCGGCGCGCC CTGGTTCGCC
GCGATCTACC TCCTGCTGTT CATCTCGCTG ATCGGCTGTC TCTGGTCGCG GGTGCACTGG
CACGCGCGGG CGTTGTTCAC CGCCCCGCCG AAGGCGCCGG CCCGGCCGGG CCGGCTGCCC
GGCGGCAGCA CCTGGACGAG CCCGCTCGAC GCCCCGGACG CCGTCGACCT GGCCCGTGGG
GCGCTCCGCG GGCGGCGGTT CCGGGTGGCC GTCGCGCCTG GTGACGCCCG CCGTCCCGAC
GGCTCGCCGG ACCACTCGGT CGCCGGGGAG AAGGGCTACC TGCGCGAGAG CGGCAACCTG
GTGTTCCACC TGGCGCTCGT CGCGCTCCTC GCCGGGATGG GGCTGGGCTC GTGGTTCGGC
TACCAGGGCA CCGTCCTGGT CGTCACCGGC AACGGGTTCG CGAACACCCT GATCTCCTAC
GACCAGTACA GCGGCGGCGA GCTGGTGGAC GCGGCCGGCC TGCCGCCGTT CTCGCTCACC
CTCGACCAGT TCTCCGCCTC GTACCAGGAC AACGGCCAGC CCGCGGACTT CCAAGCCGAC
GTCTCGTACC AGTCGGACAT CGGCTCGCCC GTGCGCACCG ACACGATCCG GGTCAACCAC
CCGCTGCGGA TCGGCAGCGC GAAGATCTAC CTGATCGGTC ACGGCTACGC GCCGCACTTC
GTCCTGCGTG ACCCCGCCGG CGCGGTCGTC TGGGAGTCCT ACGTGCCCTG CACGCCCCGG
GACGGCATGT TCACCTCGAC CTGCACGGTC AAGATCCCCG ACACCGGCCT GCCGCCGGTG
GGGGAGCGCC AGGAGCCGCA GCAGCTCGCG TTCAGCGGGG TGTTCACCCC GACCACCGTG
CTGGACCCGG GGCACGGATA CGTCTCCACC TTTCCGGCGG CGCGGGCACC CGGGCTCACA
CTCACCGGGT TCGTCGGGAA CCTGCACCTC AACGAGGGCA TCCCGCAGAA CGTCTACGCC
GTCGACACCC GGGACATGAC CCAGTTCCCG ATGACCGGGC CGGCCGGGGA GAAGCGGATC
GCCCAGGTCG TCGCCCTGAA CAACCCCGGG CAGCGGACGC TGACCGGCCT GCCGGGCGGC
CTGTCGCTCG AGGTGGACGG CGTGCACGAG TTCGCCACGT TCCAGACCAA GTCGGACCCC
TACAAGGGAC TGGTGCTGGG GGCGTCCGTC GTCATCATTC TCGGCCTCGT CGCGAGCCTG
CGGGTGCGGC GCCGCCGGGT GTGGGTGCGG GCGACCCCGC TGGACGGTGG CGGCAGCACG
GTGGAGGTCG GCGGCCTCTC CAGATCGGAC GCGCAGGGCT TCGCCGCCGA GCTGGCCGCC
CTCAGCGAGG AGATCCGGCT CGACACCACC GAGGCCGAGG CCACCGCGGA CGACACCACT
GCGGACGACA CCACTGCGGA CGGGGCCGCC ACGGGCGACA CCGCTGCGGA CGGGGAGAAG
CCGGCCGCTG CCATGCCGGC CGACCCGGTC ACGAGCACGA CCATCAGCGC CACCAGCGAA
CGGGAGCCTT GA
 
Protein sequence
MRTALVLLFL LALAAVPGSL IPQRNLNPMK VEEYFAEHPT LAPWLDRFSA FHVFGAPWFA 
AIYLLLFISL IGCLWSRVHW HARALFTAPP KAPARPGRLP GGSTWTSPLD APDAVDLARG
ALRGRRFRVA VAPGDARRPD GSPDHSVAGE KGYLRESGNL VFHLALVALL AGMGLGSWFG
YQGTVLVVTG NGFANTLISY DQYSGGELVD AAGLPPFSLT LDQFSASYQD NGQPADFQAD
VSYQSDIGSP VRTDTIRVNH PLRIGSAKIY LIGHGYAPHF VLRDPAGAVV WESYVPCTPR
DGMFTSTCTV KIPDTGLPPV GERQEPQQLA FSGVFTPTTV LDPGHGYVST FPAARAPGLT
LTGFVGNLHL NEGIPQNVYA VDTRDMTQFP MTGPAGEKRI AQVVALNNPG QRTLTGLPGG
LSLEVDGVHE FATFQTKSDP YKGLVLGASV VIILGLVASL RVRRRRVWVR ATPLDGGGST
VEVGGLSRSD AQGFAAELAA LSEEIRLDTT EAEATADDTT ADDTTADGAA TGDTAADGEK
PAAAMPADPV TSTTISATSE REP