| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6114 |
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| Symbol | ubiA |
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| ID | 5674435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7440650 |
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| End bp | 7441597 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641244966 |
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| Product | prenyltransferase |
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| Protein accession | YP_001510364 |
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| Protein GI | 158317856 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.325123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAAGGAG TACGGCCTGT GAGTGACGCC GCCTTCGCCC CAGGCATGCC CGGGCGGGCC
TCCAGCGGGC CGACGCACGG CCCGGTCCGC GCGTTCCTGC GGCTCGTCGT CATCGAGCAC
TCCGTCTTCG CACTGCCGTT CGCCTACGTG GCGGCGCTCG CGGCCTGCTT CGCGGTCTCG
CGGTCGGTGC ACTGGCGCGA CCTGGCCCTC GTCACGGTCG CGATGGTGGC GGCCCGCACG
TTCGCGATGG CCACGAACCG GATCATCGAC CGGGCCATCG ACGCCCGCAA CCCGCGTACC
GCCGGTCGCG AGCTCGTCAC CGGAGTGGTG TCCGTCCGCA CGGCGGTTGT CGGCTCGATC
GTCGCGCTCG CGGTGTTCCT CGGCTCGGCC GCGGCTCTGT CCTGGCTGTG CCTGGCACTG
GCCCCGGTCG CGGTGGCCCC GCTCTTCGTC TACTCCTACG CGAAGCGGTT CACCGACTTC
CCGCAGGCGA TCCTCGCGAT CGCCCAGGCC GTGGCCCCGG TCGGCGCCTG GATCGCCATC
ACCGGCCGGT GGTCGTGGTC GGCCGTCCTG CTCGGGCTCG CCGTCGGCAC CTGGATCGGC
GGCTTCGACC TGATCTACTC CTGCCTGGAC GCCGAGGTCG ACCGGCGGAT CGGGGTGCGC
TCCGTTCCGG CGCGGTTCGG CGTCCGGGCC GCGCTCGCGG CCTCGGTCGT CACCCACGTC
GTGACCTTCG CGCTGTTCGT CGTGTTCGGC CTGCTGGAGG ACTTCGGTGC CTGGTGGTGG
GCCGGCCTGG TGCTGACCGC GGCGGCCTTC TGCTACGAAC ACGCGATCGT CTCGCCGACC
GATCTCTCCC GGATGAACCG CGCGTTCCTC ACGGCCAATG GCTTCGTGGG GATCGGCCTG
TTCGCCTTCG CGCTGGCCGA CCTGGTCAGC CGCGGTCTGT CCGGCTGA
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| Protein sequence | MEGVRPVSDA AFAPGMPGRA SSGPTHGPVR AFLRLVVIEH SVFALPFAYV AALAACFAVS
RSVHWRDLAL VTVAMVAART FAMATNRIID RAIDARNPRT AGRELVTGVV SVRTAVVGSI
VALAVFLGSA AALSWLCLAL APVAVAPLFV YSYAKRFTDF PQAILAIAQA VAPVGAWIAI
TGRWSWSAVL LGLAVGTWIG GFDLIYSCLD AEVDRRIGVR SVPARFGVRA ALAASVVTHV
VTFALFVVFG LLEDFGAWWW AGLVLTAAAF CYEHAIVSPT DLSRMNRAFL TANGFVGIGL
FAFALADLVS RGLSG
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