| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6111 |
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| Symbol | |
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| ID | 5674432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7438201 |
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| End bp | 7439379 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641244963 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001510361 |
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| Protein GI | 158317853 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0611343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.194203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGGTCC GCGGAGCTAG GCTGGATCGC ATGGATGCCG GGCTCAAGCG CGAGATCGAA
GCCAAGGTCC ACGACGGTGC CCGGCTCAGC CGGGCCGACG GTGAGGCCCT CTACGCGAGC
GACGACCTCG CCTGGCTGGG CGGTCTCGCG CACGAGGTGC GTACCCGAAA GAACGGCGAC
CAGACCTTCT TCAACGTGAA CCGGCACCTC AACCTGACGA ACGTCTGCTC GGCCTCGTGC
GCCTACTGCT CGTTCCAACG CAAGCCCGGC GAGTCGGACG CCTACACTAT GCGCATCGAG
GAGGCCGTCC GGCTGGCGAA GGATATGGAG CCGGCCGGGA TCACCGAGCT GCACATCGTC
AACGGCCTGC ACCCGACGTT GCCGTGGCGT TACTATCCGC GGTCGCTGCG CGAGCTGGGG
AAGGCGCTGC CCGGCGTCGC GCTCAAGGCG TTCACCGCCA CCGAGATCCA CTGGTTCGAG
AAGATCAGCG GCCTCTCCGC GGACGAGATC CTGGACGAGC TCATCGACGC GGGCCTGGAG
TCGTTGACGG GCGGCGGCGC GGAGATCTTC GACTGGGAGG TGCGGCAGAA GATCGTCGGC
CACGAGACCC ACTGGGAGGA CTGGTCGCGG ATCCACCGTC TCGCGCACTC CAAGGGCCTG
CGCACGCCGT GCACGATGCT GTACGGCCAT GTCGAGGAGC CGCGGCACCG GGTCGACCAC
GTGCTGCGCC TGCGTGAGCT GCAGGACGAG ACGGGCGGTT TCGCGGTGTT CATCCCGCTG
CGCTTCCAGC ACGACTCGGT CGGCGATCCC CGCAACCGCC TGATGAACCA GCCGATGGCG
ACCGGCGCGG AGGCTCTCAA GACGTTCGCG GTGTCGCGGC TGCTGTTCGA CAACGTCGAT
CACGTCAAGT GCTTCTGGGT GATGCACGGG CTGACCACCG CCCAGCTGTC CCTGAACTTC
GGCGTCGACG ACCTCGACGG CTCGGTCGTC GAGTACAAGA TCACTCACGA CGCGGACGGC
TTCGGAACGC CGAACACGAT GACCCGGGAG GATCTTCTAT CCGTGATCCG TGACGCGGGC
TTCCGGCCGG TCGAGCGGGA CACCCGCTAC CGGGTCGTGC GCAGGTACGA CGGTCCGGAC
ACCACCCGGC GGGACAACCC CGTCTCGATC GACGCCTGA
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| Protein sequence | MSVRGARLDR MDAGLKREIE AKVHDGARLS RADGEALYAS DDLAWLGGLA HEVRTRKNGD
QTFFNVNRHL NLTNVCSASC AYCSFQRKPG ESDAYTMRIE EAVRLAKDME PAGITELHIV
NGLHPTLPWR YYPRSLRELG KALPGVALKA FTATEIHWFE KISGLSADEI LDELIDAGLE
SLTGGGAEIF DWEVRQKIVG HETHWEDWSR IHRLAHSKGL RTPCTMLYGH VEEPRHRVDH
VLRLRELQDE TGGFAVFIPL RFQHDSVGDP RNRLMNQPMA TGAEALKTFA VSRLLFDNVD
HVKCFWVMHG LTTAQLSLNF GVDDLDGSVV EYKITHDADG FGTPNTMTRE DLLSVIRDAG
FRPVERDTRY RVVRRYDGPD TTRRDNPVSI DA
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