| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6102 |
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| Symbol | |
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| ID | 5674423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 7428946 |
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| End bp | 7430658 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641244954 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_001510352 |
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| Protein GI | 158317844 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.229547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.024124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACGCCG TGGCAGTCGT GACACCTGGG CCGCAAGCCC GTGGATCCGG GTCGGATCCG
GCACCTTCCC AGGTCAGTCG GCCCGGCGAG GTGTGGCTGG TGGGGGCTGG GCCGGGTGAT
CCCGGGCTGC TGACGGTCCG CGGGCGGGAG CTGCTCGCCA CCGCCGACGT CGTCGTCACC
GACCGCCTGG CCGCGGCCGT CCTCCTCGAC GTCGCCCGGC CGGACGCCCG CGTCATCCAC
GTGGGCAAGA GCCCGACGAC GTCCCGCAGC CAGGACGAGG TCAACGCGCT GCTGGTCGAG
CACGCGCGCG CCGGCGCCCG GGTGGTGCGG CTCAAAGGCG GCGACCCGTT CCTGCTTGGC
CGGGGCGGCG AGGAGGCCGA GGCCTGCGCC GCCGCCGGTG TCAGCTGCAC CGTGGTCCCC
GGCGTGACCT CCGCGATCGC CGTGCCCGCG TATGCCGGCA TCCCCGTCAC GCACCGTGGC
GTCGCGCAGG ATCTCGCGAT CATCTCCGGC CACCTGCCGC CGGGGCACCC CGAGTCGACG
GTCGACTGGG CCGCGCTCGG TGCCTCCCGC GCCACGATCG TCGTGCTCAT GGGGGTCGCC
CGGCTGGTCG ACATCGTCGA CGCGCTGCTG GCGGGCGGAC GTCCGCCCGG GACCCCGGCC
GCTGTCATCG AGCGCGGCAC GACTCCGGCA CAGCGGGTGC TCCGCACGAC CCTGGACGCC
CTCGTCGTCG ACGCCGTGGC CTTCGGGCTG CGCTCCCCGG CGGTGCTGGT CGTCGGCGAG
GTCGCCGCGC GCCGGGACGC TGCCGTCCCC ATCCCGCCGG TGGTCGAGGC TGACGCCGAT
CACGGAGAGC GGGTCCCTGA CGGGTACGGC ACGGGGGACA CGCGCGTCCC CGACGGGCAG
GGCATTTCCG ACGGTCGGGG CGTCTCCGGC GGGCAGGGCG GCCGCGCCTC GTCGGGGCGG
CCCGGGGTGG CCGGCGACGC TCCGCTGGCG GGCATCCGCG TCCTCGTCCC GCGCACCAGG
GCGCGGCAGG GGCTGCTCGC CCGCAGGCTG CGCGAGCTGG GCGGCGAGGC CGTCGAGACG
GTGGTCAGCC GGCTCGTCCC GACCGGGGAC GCGACGCCGC TGCGCGAGGC GCTTCCAGGT
GCGGACGGCC TCGTGCTGGC TGACTCCGAC GAGGTCGCCG CAGTGGTCTC GCTGCTGCGG
GGCGCGGGTA CGGACGTGCG GGCGCTCGCC GGGCTGACGC TCGTCGCGGC ATCCGCCTCG
GCCGCCGCCG CGCTCGACGC GCTGGGGCTG GCCTGCGCGC GGTCGTCGGC CGAGGTCCAG
GTCGCCCACA CGGTGGTGAC GGAGGTCCCG GTGCCCGGGC TGCGGGTGGT GATCTGCGGG
GCCGCGCCGC CGCCGGTGGG GATCCGGACG CTGCGTCGCG TGCGGCTGCT CGCCGACGCG
CCCGCCGAGG CCGACCCGCG GATCGCCGAG GAACTGCGCC ACGGTGACGT CGACGCCGTC
GCGCTGGCGT CGTCGACGGC GGCCCGCTGC CTGGTCGAAC TGTACGGTCC GTTGCCGGAC
AGTGTCCTCG TCGCCGCGAT GGGCCGGCGC ACCGCGCAGG CCTGCGAGGC TGTTGGCCTG
CGGGTGGACG CGATCCCGTC CGAGCCGGGG ATCTACCCGC TCGCGGCGGC GGTCGCCGAT
CTCGTGGCCG GCCGGCGAGC GCCGACGGCG TAG
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| Protein sequence | MHAVAVVTPG PQARGSGSDP APSQVSRPGE VWLVGAGPGD PGLLTVRGRE LLATADVVVT
DRLAAAVLLD VARPDARVIH VGKSPTTSRS QDEVNALLVE HARAGARVVR LKGGDPFLLG
RGGEEAEACA AAGVSCTVVP GVTSAIAVPA YAGIPVTHRG VAQDLAIISG HLPPGHPEST
VDWAALGASR ATIVVLMGVA RLVDIVDALL AGGRPPGTPA AVIERGTTPA QRVLRTTLDA
LVVDAVAFGL RSPAVLVVGE VAARRDAAVP IPPVVEADAD HGERVPDGYG TGDTRVPDGQ
GISDGRGVSG GQGGRASSGR PGVAGDAPLA GIRVLVPRTR ARQGLLARRL RELGGEAVET
VVSRLVPTGD ATPLREALPG ADGLVLADSD EVAAVVSLLR GAGTDVRALA GLTLVAASAS
AAAALDALGL ACARSSAEVQ VAHTVVTEVP VPGLRVVICG AAPPPVGIRT LRRVRLLADA
PAEADPRIAE ELRHGDVDAV ALASSTAARC LVELYGPLPD SVLVAAMGRR TAQACEAVGL
RVDAIPSEPG IYPLAAAVAD LVAGRRAPTA
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