Gene Franean1_6101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_6101 
Symbol 
ID5674422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp7428373 
End bp7428834 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content75% 
IMG OID641244953 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_001510351 
Protein GI158317843 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.32194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0194652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGTC TCCTGGTGAT CGGACACGGC TCGCGGCGGG CGGAGGCGAA CGCCACGGTC 
GTCGAGCTCG CGCGCACGCT GGCCGGTGCC GACACCGACA GCCCAGCCCC AGCCCCCGGC
GACGGGAGCG GCGGCGGCAT GCCGACCGGC ACGCCCCCCG CCTGGGACGC GGTGGAACCG
GCCTTCCTCG AGATCGCCCG CCCGGACATC GCGGAGGGCT ACGCCGCGCT GGTCCGCACC
GGCTGCTCGG AGATCGTGGC GCATCCCTTC TTCCTGTTCG ACGGGAACCA CACCAGCCGC
GACATCCCGG ACGCCCTGGC GGCAGCGCAG ACGGACCACC CCGGGACGAG CTGGACGGTC
ACCCAGCCGC TCGGGCTGCA TCCGGGGGTC GTGCGGGCCG TGCAGGCCCG CATCGAGGAC
GCGCTGCACC AGGCCGCCGC CGCGGCACCG GCACATTCCT GA
 
Protein sequence
MRGLLVIGHG SRRAEANATV VELARTLAGA DTDSPAPAPG DGSGGGMPTG TPPAWDAVEP 
AFLEIARPDI AEGYAALVRT GCSEIVAHPF FLFDGNHTSR DIPDALAAAQ TDHPGTSWTV
TQPLGLHPGV VRAVQARIED ALHQAAAAAP AHS